RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CCT4P50991 539 aaKnown RBP19.69■□□□□ 0.74
TRIM13-201ENST00000356017 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
TRIM13-201ENST00000356017 PXDNLA1KZ92 1463 aa19.68■□□□□ 0.74
TRIM13-201ENST00000356017 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
TRIM13-201ENST00000356017 ST5P78524 1137 aa19.68■□□□□ 0.74
TRIM13-201ENST00000356017 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
TRIM13-201ENST00000356017 PPP1R1BQ9UD71 204 aaPredicted RBP19.68■□□□□ 0.74
TRIM13-201ENST00000356017 NTSR2O95665 410 aa19.67■□□□□ 0.74
TRIM13-201ENST00000356017 PRR5LQ6MZQ0 368 aa19.67■□□□□ 0.74
TRIM13-201ENST00000356017 ANKRD36CQ5JPF3 1778 aa19.66■□□□□ 0.74
TRIM13-201ENST00000356017 GCKRQ14397 625 aa19.66■□□□□ 0.74
TRIM13-201ENST00000356017 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
TRIM13-201ENST00000356017 ZBTB38Q8NAP3 1195 aaPredicted RBP19.66■□□□□ 0.74
TRIM13-201ENST00000356017 ABCC4O15439 1325 aa19.66■□□□□ 0.74
TRIM13-201ENST00000356017 SH3TC1Q8TE82 1336 aa19.66■□□□□ 0.74
TRIM13-201ENST00000356017 HSP90B1P14625 803 aaKnown RBP19.65■□□□□ 0.74
TRIM13-201ENST00000356017 DZIP1LQ8IYY4 767 aaKnown RBP19.65■□□□□ 0.74
TRIM13-201ENST00000356017 PCCAP05165 728 aaPredicted RBP19.65■□□□□ 0.74
TRIM13-201ENST00000356017 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
TRIM13-201ENST00000356017 CD2APQ9Y5K6 639 aa19.65■□□□□ 0.74
TRIM13-201ENST00000356017 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
TRIM13-201ENST00000356017 NUTM1Q86Y26 1132 aa19.64■□□□□ 0.73
TRIM13-201ENST00000356017 FAM89AQ96GI7 184 aa19.64■□□□□ 0.73
TRIM13-201ENST00000356017 BRIP1Q9BX63 1249 aa19.64■□□□□ 0.73
TRIM13-201ENST00000356017 ERFEQ4G0M1 354 aa19.63■□□□□ 0.73
TRIM13-201ENST00000356017 C9orf78Q9NZ63 289 aaPredicted RBP19.63■□□□□ 0.73
TRIM13-201ENST00000356017 NRXN2Q9P2S2 1712 aa19.63■□□□□ 0.73
TRIM13-201ENST00000356017 PDE6BP35913 854 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 SLC10A5Q5PT55 438 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 LRP5O75197 1615 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 H7C1W4 665 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 GRM8O00222 908 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 PLIN1O60240 522 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 PDZRN3Q9UPQ7 1066 aa19.62■□□□□ 0.73
TRIM13-201ENST00000356017 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
TRIM13-201ENST00000356017 TGFB2P61812 414 aa19.61■□□□□ 0.73
TRIM13-201ENST00000356017 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
TRIM13-201ENST00000356017 RIC1Q4ADV7 1423 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 CDHR2Q9BYE9 1310 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 IRS4O14654 1257 aaPredicted RBP19.6■□□□□ 0.73
TRIM13-201ENST00000356017 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
TRIM13-201ENST00000356017 RRP1P56182 461 aaKnown RBP19.6■□□□□ 0.73
TRIM13-201ENST00000356017 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 CCDC24Q8N4L8 307 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 NLRP3Q96P20 1036 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 TNNQ9UQP3 1299 aa19.6■□□□□ 0.73
TRIM13-201ENST00000356017 TMEM57Q8N5G2 664 aa19.59■□□□□ 0.73
TRIM13-201ENST00000356017 FHDC1Q9C0D6 1143 aaPredicted RBP19.59■□□□□ 0.73
TRIM13-201ENST00000356017 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
TRIM13-201ENST00000356017 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
TRIM13-201ENST00000356017 UTYO14607 1347 aa19.58■□□□□ 0.73
TRIM13-201ENST00000356017 SYNE4Q8N205 404 aa19.58■□□□□ 0.73
TRIM13-201ENST00000356017 USP44Q9H0E7 712 aa19.58■□□□□ 0.73
TRIM13-201ENST00000356017 ABCC12Q96J65 1359 aa19.58■□□□□ 0.72
TRIM13-201ENST00000356017 KLRG2A4D1S0 409 aaPredicted RBP19.58■□□□□ 0.72
TRIM13-201ENST00000356017 RLBP1P12271 317 aa19.58■□□□□ 0.72
TRIM13-201ENST00000356017 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.72
TRIM13-201ENST00000356017 H0YIN7 160 aa19.57■□□□□ 0.72
TRIM13-201ENST00000356017 PDE8AO60658 829 aa19.57■□□□□ 0.72
TRIM13-201ENST00000356017 HCLS1P14317 486 aaPredicted RBP19.57■□□□□ 0.72
TRIM13-201ENST00000356017 CASP7P55210 303 aa19.57■□□□□ 0.72
TRIM13-201ENST00000356017 PANK1Q8TE04 598 aa19.57■□□□□ 0.72
TRIM13-201ENST00000356017 GNAI3P08754 354 aa19.56■□□□□ 0.72
TRIM13-201ENST00000356017 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
TRIM13-201ENST00000356017 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
TRIM13-201ENST00000356017 SYT17Q9BSW7 474 aa19.56■□□□□ 0.72
TRIM13-201ENST00000356017 PLA2G12BQ9BX93 195 aa19.56■□□□□ 0.72
TRIM13-201ENST00000356017 CRY2Q49AN0 593 aa19.55■□□□□ 0.72
TRIM13-201ENST00000356017 CHMP4BQ9H444 224 aaKnown RBP19.55■□□□□ 0.72
TRIM13-201ENST00000356017 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
TRIM13-201ENST00000356017 UBTFL1P0CB47 393 aaPredicted RBP19.54■□□□□ 0.72
TRIM13-201ENST00000356017 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
TRIM13-201ENST00000356017 C2CD5Q86YS7 1000 aa19.54■□□□□ 0.72
TRIM13-201ENST00000356017 SRGNP10124 158 aa19.54■□□□□ 0.72
TRIM13-201ENST00000356017 SF3B3Q15393 1217 aaKnown RBP19.54■□□□□ 0.72
TRIM13-201ENST00000356017 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
TRIM13-201ENST00000356017 KIF13BQ9NQT8 1826 aa19.54■□□□□ 0.72
TRIM13-201ENST00000356017 N4BP2Q86UW6 1770 aaPredicted RBP19.53■□□□□ 0.72
TRIM13-201ENST00000356017 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
TRIM13-201ENST00000356017 MASTLQ96GX5 879 aa19.53■□□□□ 0.72
TRIM13-201ENST00000356017 A0A0G2JLW4 131 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 NPR1P16066 1061 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 DPEP1P16444 411 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 CTSWP56202 376 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 MEIS3Q99687 375 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 COG6Q9Y2V7 657 aa19.52■□□□□ 0.72
TRIM13-201ENST00000356017 ZBTB7BO15156 539 aaPredicted RBP19.51■□□□□ 0.71
TRIM13-201ENST00000356017 CHRNA5P30532 468 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 STYK1Q6J9G0 422 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
TRIM13-201ENST00000356017 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 NLGN2Q8NFZ4 835 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
TRIM13-201ENST00000356017 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
TRIM13-201ENST00000356017 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms