RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ME1P48163 572 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 AK7Q96M32 723 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 PDCP20941 246 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-202ENST00000355815 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
SREBF1-202ENST00000355815 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
SREBF1-202ENST00000355815 SERPINC1P01008 464 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 TTC39AQ5SRH9 613 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 HIP1O00291 1037 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 IDH1O75874 414 aaKnown RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 CEP152O94986 1710 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 POLR1AO95602 1720 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC70Q6NSX1 233 aa16.5■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
SREBF1-202ENST00000355815 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
SREBF1-202ENST00000355815 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SREBF1-202ENST00000355815 TIMM10P62072 90 aa16.49■□□□□ 0.23
SREBF1-202ENST00000355815 TMCO3Q6UWJ1 677 aa16.49■□□□□ 0.23
SREBF1-202ENST00000355815 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
SREBF1-202ENST00000355815 BRF1Q92994 677 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 GLI2P10070 1586 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
SREBF1-202ENST00000355815 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC158Q5M9N0 1113 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 TAF3Q5VWG9 929 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 PLCD4Q9BRC7 762 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
SREBF1-202ENST00000355815 PPRC1Q5VV67 1664 aaKnown RBP16.48■□□□□ 0.23
SREBF1-202ENST00000355815 SYT1P21579 422 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 ACBD3Q9H3P7 528 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 RDXP35241 583 aaKnown RBP16.47■□□□□ 0.23
SREBF1-202ENST00000355815 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC94Q9BW85 323 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-202ENST00000355815 DEF6Q9H4E7 631 aa16.47■□□□□ 0.23
SREBF1-202ENST00000355815 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 ZSCAN22P10073 491 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-202ENST00000355815 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 ZSCAN31Q96LW9 406 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-202ENST00000355815 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 STK38Q15208 465 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 CPLX2Q6PUV4 134 aaKnown RBP16.46■□□□□ 0.23
SREBF1-202ENST00000355815 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 SNX14Q9Y5W7 946 aa16.46■□□□□ 0.23
SREBF1-202ENST00000355815 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 TFCP2Q12800 502 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 TRIM29Q14134 588 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 KIF18AQ8NI77 898 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 PTH1RQ03431 593 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 KIF2CQ99661 725 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 TIGD1Q96MW7 591 aa16.45■□□□□ 0.22
SREBF1-202ENST00000355815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
SREBF1-202ENST00000355815 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 CCDC186Q7Z3E2 898 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-202ENST00000355815 SGSM2O43147 1006 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
SREBF1-202ENST00000355815 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
SREBF1-202ENST00000355815 ADGRB3O60242 1522 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 MCM5P33992 734 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 BICDL1Q6ZP65 573 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 A1BGP04217 495 aa16.43■□□□□ 0.22
SREBF1-202ENST00000355815 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-202ENST00000355815 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
SREBF1-202ENST00000355815 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-202ENST00000355815 DBNDD2Q9BQY9 259 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms