RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 DESP17661 470 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 MCM5P33992 734 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 METAP2P50579 478 aaKnown RBP eCLIP18.94■□□□□ 0.62
SHTN1-202ENST00000355371 TSHZ3Q63HK5 1081 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 CCDC82Q8N4S0 544 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 ZCRB1Q8TBF4 217 aaKnown RBP18.94■□□□□ 0.62
SHTN1-202ENST00000355371 TMX3Q96JJ7 454 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 GRM8O00222 908 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 CCDC96Q2M329 555 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 TSPYL1Q9H0U9 437 aa18.94■□□□□ 0.62
SHTN1-202ENST00000355371 KIF5CO60282 957 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
SHTN1-202ENST00000355371 SNRKQ9NRH2 765 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
SHTN1-202ENST00000355371 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 KANK3Q6NY19 840 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 XAGE3Q8WTP9 111 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 POTEJP0CG39 1038 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 ABCC1P33527 1531 aa18.93■□□□□ 0.62
SHTN1-202ENST00000355371 EHMT1Q9H9B1 1298 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 ANXA1P04083 346 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 SNX21Q969T3 373 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 LARP6Q9BRS8 491 aaKnown RBP18.92■□□□□ 0.62
SHTN1-202ENST00000355371 ZSCAN22P10073 491 aaPredicted RBP18.92■□□□□ 0.62
SHTN1-202ENST00000355371 CHRNA2Q15822 529 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 VPS36Q86VN1 386 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 TFIP11Q9UBB9 837 aaKnown RBP18.92■□□□□ 0.62
SHTN1-202ENST00000355371 USP25Q9UHP3 1055 aa18.92■□□□□ 0.62
SHTN1-202ENST00000355371 NEFHP12036 1026 aa18.91■□□□□ 0.62
SHTN1-202ENST00000355371 COPS6Q7L5N1 327 aa18.91■□□□□ 0.62
SHTN1-202ENST00000355371 IL15P40933 162 aaPredicted RBP18.91■□□□□ 0.62
SHTN1-202ENST00000355371 MATR3P43243 847 aaKnown RBP eCLIP18.91■□□□□ 0.62
SHTN1-202ENST00000355371 AMPD3Q01432 767 aa18.91■□□□□ 0.62
SHTN1-202ENST00000355371 SEPT7Q16181 437 aaKnown RBP18.91■□□□□ 0.62
SHTN1-202ENST00000355371 CACNA2D4Q7Z3S7 1137 aa18.91■□□□□ 0.62
SHTN1-202ENST00000355371 KRT23Q9C075 422 aa18.91■□□□□ 0.62
SHTN1-202ENST00000355371 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 MTHFSDQ2M296 383 aaKnown RBP18.9■□□□□ 0.62
SHTN1-202ENST00000355371 KAT14Q9H8E8 782 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 GSTO1P78417 241 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 TCP11L1Q9NUJ3 509 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 KIAA0754O94854 1291 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 GDPD2Q9HCC8 539 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 CASQ1P31415 396 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 UHRF1BP1Q6BDS2 1440 aa18.9■□□□□ 0.62
SHTN1-202ENST00000355371 VAMP4O75379 141 aa18.89■□□□□ 0.62
SHTN1-202ENST00000355371 HAND2P61296 217 aa18.89■□□□□ 0.62
SHTN1-202ENST00000355371 ZRSR2Q15696 482 aaKnown RBP18.89■□□□□ 0.62
SHTN1-202ENST00000355371 TMCO3Q6UWJ1 677 aa18.89■□□□□ 0.62
SHTN1-202ENST00000355371 TMTC2Q8N394 836 aa18.89■□□□□ 0.62
SHTN1-202ENST00000355371 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.62
SHTN1-202ENST00000355371 TSPY2A6NKD2 308 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 YEATS4O95619 227 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 MCMDC2Q4G0Z9 681 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 MICU3Q86XE3 530 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 CCDC178Q5BJE1 867 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 CALML4Q96GE6 196 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 TRPM2O94759 1503 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 CETN2P41208 172 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 CNNM2Q9H8M5 875 aa18.89■□□□□ 0.61
SHTN1-202ENST00000355371 MCM3P25205 808 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 MAP3K5Q99683 1374 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 C6orf229H3BNL8 230 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 RRP9O43818 475 aaKnown RBP18.88■□□□□ 0.61
SHTN1-202ENST00000355371 CCDC102BQ68D86 513 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
SHTN1-202ENST00000355371 ATP2B3Q16720 1220 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 BRF1Q92994 677 aa18.88■□□□□ 0.61
SHTN1-202ENST00000355371 BMP15O95972 392 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 ZNF165P49910 485 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 USO1O60763 962 aaKnown RBP18.87■□□□□ 0.61
SHTN1-202ENST00000355371 PPP4R3AQ6IN85 833 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 PAF1Q8N7H5 531 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 CCDC102AQ96A19 550 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 NUP88Q99567 741 aaPredicted RBP18.87■□□□□ 0.61
SHTN1-202ENST00000355371 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
SHTN1-202ENST00000355371 MAP9Q49MG5 647 aa18.87■□□□□ 0.61
SHTN1-202ENST00000355371 NPC1L1Q9UHC9 1359 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 TRIM21P19474 475 aaKnown RBP18.86■□□□□ 0.61
SHTN1-202ENST00000355371 KIF4BQ2VIQ3 1234 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 CARD14Q9BXL6 1004 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 LRRC27Q9C0I9 530 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 DNMT1P26358 1616 aaKnown RBP18.86■□□□□ 0.61
SHTN1-202ENST00000355371 ADCY5O95622 1261 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
SHTN1-202ENST00000355371 WTAPQ15007 396 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 LMBR1LQ6UX01 489 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 FAM114A1Q8IWE2 563 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 GOLGA6L9A6NEM1 432 aa18.86■□□□□ 0.61
SHTN1-202ENST00000355371 CENPHQ9H3R5 247 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms