RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
SCN8A-202ENST00000355133 YEATS4O95619 227 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 ST5P78524 1137 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 DYDC1Q8WWB3 177 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 STX6O43752 255 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 TMCO3Q6UWJ1 677 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 IQSEC3Q9UPP2 1182 aaPredicted RBP15.25■□□□□ 0.03
SCN8A-202ENST00000355133 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 ERICH4A6NGS2 130 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 CCDC152Q4G0S7 254 aa15.25■□□□□ 0.03
SCN8A-202ENST00000355133 USO1O60763 962 aaKnown RBP15.24■□□□□ 0.03
SCN8A-202ENST00000355133 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
SCN8A-202ENST00000355133 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
SCN8A-202ENST00000355133 CRNKL1Q9BZJ0 848 aaKnown RBP15.24■□□□□ 0.03
SCN8A-202ENST00000355133 AMPD3Q01432 767 aa15.24■□□□□ 0.03
SCN8A-202ENST00000355133 SLC39A6Q13433 755 aa15.24■□□□□ 0.03
SCN8A-202ENST00000355133 NSD2O96028 1365 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
SCN8A-202ENST00000355133 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
SCN8A-202ENST00000355133 TMC6Q7Z403 805 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 GBP3Q9H0R5 595 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 DDX19AQ9NUU7 478 aaKnown RBP15.23■□□□□ 0.03
SCN8A-202ENST00000355133 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 KIF18AQ8NI77 898 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 SYCP3Q8IZU3 236 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 XAGE3Q8WTP9 111 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 UBA7P41226 1012 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 CADPS2Q86UW7 1296 aa15.23■□□□□ 0.03
SCN8A-202ENST00000355133 DENND4BO75064 1496 aaPredicted RBP15.23■□□□□ 0.03
SCN8A-202ENST00000355133 IGHDP01880 384 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 ZCRB1Q8TBF4 217 aaKnown RBP15.22■□□□□ 0.03
SCN8A-202ENST00000355133 RHPN1Q8TCX5 695 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 IFFO1Q0D2I5 559 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 PPM1FP49593 454 aaPredicted RBP15.22■□□□□ 0.03
SCN8A-202ENST00000355133 CETN1Q12798 172 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 CYP7A1P22680 504 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 CTNNA2P26232 953 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 STX1AQ16623 288 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 CCDC91Q7Z6B0 441 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 FERMT2Q96AC1 680 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
SCN8A-202ENST00000355133 GSTO1P78417 241 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
SCN8A-202ENST00000355133 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 MMRN2Q9H8L6 949 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 PRC1O43663 620 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 COPS6Q7L5N1 327 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 NECAB1Q8N987 351 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 KLF18A0A0U1RQI7 1052 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 TMCO5BA8MYB1 307 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 MYO1BO43795 1136 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 PAFAH1B1P43034 410 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 BCCIPQ9P287 314 aaKnown RBP eCLIP15.21■□□□□ 0.03
SCN8A-202ENST00000355133 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.03
SCN8A-202ENST00000355133 WTAPQ15007 396 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 BRF1Q92994 677 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 MEIS3Q99687 375 aa15.21■□□□□ 0.03
SCN8A-202ENST00000355133 MCM5P33992 734 aa15.21■□□□□ 0.02
SCN8A-202ENST00000355133 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.02
SCN8A-202ENST00000355133 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.02
SCN8A-202ENST00000355133 FANCAO15360 1455 aa15.2■□□□□ 0.02
SCN8A-202ENST00000355133 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
SCN8A-202ENST00000355133 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
SCN8A-202ENST00000355133 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
SCN8A-202ENST00000355133 PRPF4BQ13523 1007 aaKnown RBP15.2■□□□□ 0.02
SCN8A-202ENST00000355133 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
SCN8A-202ENST00000355133 PICALMQ13492 652 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 HOOK3Q86VS8 718 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 TCEANC2Q96MN5 208 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 BICD1Q96G01 975 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 C16orf45Q96MC5 204 aaPredicted RBP15.19■□□□□ 0.02
SCN8A-202ENST00000355133 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
SCN8A-202ENST00000355133 NOP2P46087 812 aaKnown RBP15.18■□□□□ 0.02
SCN8A-202ENST00000355133 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
SCN8A-202ENST00000355133 TNRQ92752 1358 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
SCN8A-202ENST00000355133 MSH6P52701 1360 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 TBCAO75347 108 aaKnown RBP15.18■□□□□ 0.02
SCN8A-202ENST00000355133 LMBR1LQ6UX01 489 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 ALS2CR12Q96Q35 445 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 IL16Q14005 1332 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
SCN8A-202ENST00000355133 SDSP20132 328 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 KRT23Q9C075 422 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms