RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 PRAM1Q96QH2 718 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 CALRP27797 417 aaKnown RBP12.47□□□□□ -0.41
PKP1-202ENST00000352845 ST5P78524 1137 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
PKP1-202ENST00000352845 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 UBR1Q8IWV7 1749 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 OAS2P29728 719 aaKnown RBP12.46□□□□□ -0.41
PKP1-202ENST00000352845 TYRO3Q06418 890 aa12.46□□□□□ -0.41
PKP1-202ENST00000352845 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.41
PKP1-202ENST00000352845 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
PKP1-202ENST00000352845 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
PKP1-202ENST00000352845 MMS22LQ6ZRQ5 1243 aa12.46□□□□□ -0.41
PKP1-202ENST00000352845 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
PKP1-202ENST00000352845 IL13P35225 146 aa12.46□□□□□ -0.42
PKP1-202ENST00000352845 TDO2P48775 406 aa12.46□□□□□ -0.42
PKP1-202ENST00000352845 CCAR2Q8N163 923 aaKnown RBP12.46□□□□□ -0.42
PKP1-202ENST00000352845 TACO1Q9BSH4 297 aaKnown RBP12.46□□□□□ -0.42
PKP1-202ENST00000352845 CABP1Q9NZU7 370 aa12.46□□□□□ -0.42
PKP1-202ENST00000352845 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.42
PKP1-202ENST00000352845 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.42
PKP1-202ENST00000352845 MRVI1Q9Y6F6 885 aa12.46□□□□□ -0.42
PKP1-202ENST00000352845 CEP85Q6P2H3 762 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
PKP1-202ENST00000352845 SUFUQ9UMX1 484 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
PKP1-202ENST00000352845 SKILP12757 684 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
PKP1-202ENST00000352845 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
PKP1-202ENST00000352845 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
PKP1-202ENST00000352845 ANKRD20A12PQ8NF67 263 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 UBXN4Q92575 508 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 MRFAP1L1Q96HT8 127 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 CBX8Q9HC52 389 aa12.45□□□□□ -0.42
PKP1-202ENST00000352845 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.42
PKP1-202ENST00000352845 C3P01024 1663 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
PKP1-202ENST00000352845 MAP2K2P36507 400 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 CORO7P57737 925 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
PKP1-202ENST00000352845 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
PKP1-202ENST00000352845 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 F13A1P00488 732 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 REXO1L1PQ8IX06 675 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 EFCAB13Q8IY85 973 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 EIF3CLB5ME19 914 aaKnown RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 KCNJ6P48051 423 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 EP400NLQ6ZTU2 488 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKP1-202ENST00000352845 EIF3CQ99613 913 aaKnown RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 FAM107BQ9H098 131 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 ADAM21Q9UKJ8 722 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 METP08581 1390 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
PKP1-202ENST00000352845 TUBGCP6Q96RT7 1819 aa12.43□□□□□ -0.42
PKP1-202ENST00000352845 STX6O43752 255 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 LMAN1P49257 510 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 GSDMDP57764 484 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 WAPLQ7Z5K2 1190 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
PKP1-202ENST00000352845 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
PKP1-202ENST00000352845 MSH6P52701 1360 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 USP27XA6NNY8 438 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 FIBPO43427 364 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 USP8P40818 1118 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
PKP1-202ENST00000352845 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
PKP1-202ENST00000352845 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
PKP1-202ENST00000352845 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 DCTN1Q14203 1278 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 CCDC144BQ3MJ40 725 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
PKP1-202ENST00000352845 ATP7BP35670 1465 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 KIF3CO14782 793 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
PKP1-202ENST00000352845 NPHP1O15259 732 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 ANO6Q4KMQ2 910 aa12.41□□□□□ -0.42
PKP1-202ENST00000352845 RBM43Q6ZSC3 357 aaKnown RBP12.41□□□□□ -0.42
PKP1-202ENST00000352845 DDX19AQ9NUU7 478 aaKnown RBP12.41□□□□□ -0.42
PKP1-202ENST00000352845 DLC1Q96QB1 1528 aa12.4□□□□□ -0.42
PKP1-202ENST00000352845 CCP110O43303 1012 aa12.4□□□□□ -0.42
PKP1-202ENST00000352845 CCZ1BP86790 482 aa12.4□□□□□ -0.42
PKP1-202ENST00000352845 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms