RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 USP48Q86UV5 1035 aa12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 WASHC2AQ641Q2 1341 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 NPR1P16066 1061 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 FAM122AQ96E09 287 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 PSMD1Q99460 953 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 COL4A5P29400 1685 aa12.69□□□□□ -0.38
UBE2D3-205ENST00000350435 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
UBE2D3-205ENST00000350435 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
UBE2D3-205ENST00000350435 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
UBE2D3-205ENST00000350435 CYP19A1P11511 503 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-205ENST00000350435 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-205ENST00000350435 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
UBE2D3-205ENST00000350435 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
UBE2D3-205ENST00000350435 TRIM17Q9Y577 477 aa12.66□□□□□ -0.38
UBE2D3-205ENST00000350435 VCANP13611 3396 aa12.66□□□□□ -0.38
UBE2D3-205ENST00000350435 A0A087WZG4 1122 aa12.65□□□□□ -0.38
UBE2D3-205ENST00000350435 A0A1W2PPC1 479 aa12.65□□□□□ -0.38
UBE2D3-205ENST00000350435 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-205ENST00000350435 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
UBE2D3-205ENST00000350435 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
UBE2D3-205ENST00000350435 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 DLK2Q6UY11 383 aa12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 DPF3Q92784 378 aa12.64□□□□□ -0.39
UBE2D3-205ENST00000350435 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 CANXP27824 592 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 GMPSP49915 693 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 EYA1Q99502 592 aa12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-205ENST00000350435 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 SPTBN5Q9NRC6 3674 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 MTHFSP49914 203 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 OTOP1Q7RTM1 612 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 TRPM4Q8TD43 1214 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
UBE2D3-205ENST00000350435 NPC1L1Q9UHC9 1359 aa12.61□□□□□ -0.39
UBE2D3-205ENST00000350435 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
UBE2D3-205ENST00000350435 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
UBE2D3-205ENST00000350435 RAPGEFL1Q9UHV5 662 aa12.61□□□□□ -0.39
UBE2D3-205ENST00000350435 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
UBE2D3-205ENST00000350435 LAMA3Q16787 3333 aa12.6□□□□□ -0.39
UBE2D3-205ENST00000350435 PTPN22Q9Y2R2 807 aa12.6□□□□□ -0.39
UBE2D3-205ENST00000350435 H7C1D1 291 aa12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 CXCL9Q07325 125 aa12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 SLC4A8Q2Y0W8 1093 aa12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
UBE2D3-205ENST00000350435 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 FYB1O15117 783 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 TM4SF4P48230 202 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 CNOT7Q9UIV1 285 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 MRC1P22897 1456 aa12.58□□□□□ -0.4
UBE2D3-205ENST00000350435 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-205ENST00000350435 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
UBE2D3-205ENST00000350435 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
UBE2D3-205ENST00000350435 Q7L0L9 218 aa12.57□□□□□ -0.4
UBE2D3-205ENST00000350435 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-205ENST00000350435 ZBTB22O15209 634 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 SREBF2Q12772 1141 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 NBPF11Q86T75 865 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 NR2E3Q9Y5X4 410 aa12.56□□□□□ -0.4
UBE2D3-205ENST00000350435 TNIP1Q15025 636 aa12.55□□□□□ -0.4
UBE2D3-205ENST00000350435 STARD3NLO95772 234 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 AOC3Q16853 763 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 SNX27Q96L92 541 aa12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-205ENST00000350435 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms