RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 SGSM2O43147 1006 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 CAVIN2O95810 425 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 SARM1Q6SZW1 724 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 DDX19AQ9NUU7 478 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-202ENST00000348749 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 HOXB7P09629 217 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 CCDC144BQ3MJ40 725 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TNRQ92752 1358 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 ZSCAN31Q96LW9 406 aaPredicted RBP12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TTC41PQ6P2S7 1318 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 GJB2P29033 226 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 KRT85P78386 507 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 TM6SF1Q9BZW5 370 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 FHOD1Q9Y613 1164 aa12.18□□□□□ -0.46
CHRNA1-202ENST00000348749 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 LIG1P18858 919 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 RAD51AP2Q09MP3 1159 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 RUFY2Q8WXA3 655 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 MRFAP1L1Q96HT8 127 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 L2HGDHQ9H9P8 463 aa12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-202ENST00000348749 USP27XA6NNY8 438 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 IL25Q9H293 177 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 ZNF165P49910 485 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 TXLNBQ8N3L3 684 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 KCNB2Q92953 911 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 EYA1Q99502 592 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 V9GYY5 206 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-202ENST00000348749 PIK3C2AO00443 1686 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 FOXO3O43524 673 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 LARGE1O95461 756 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 DACT1Q9NYF0 836 aa12.15□□□□□ -0.46
CHRNA1-202ENST00000348749 NWD1Q149M9 1564 aa12.15□□□□□ -0.47
CHRNA1-202ENST00000348749 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 PNMA6AP0CW24 399 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 SKILP12757 684 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 PLA2G4AP47712 749 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 AMPHP49418 695 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CCZ1BP86790 482 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CCZ1P86791 482 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CAMK4Q16566 473 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 SCAND2PQ9GZW5 306 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 MED1Q15648 1581 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 TUBB4AP04350 444 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 CLCN6P51797 869 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 TPM4P67936 248 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
CHRNA1-202ENST00000348749 VPS37CA5D8V6 355 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 ATP8B1O43520 1251 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 ZRANB2O95218 330 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 MTX1Q13505 466 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 IQCB1Q15051 598 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 CCDC93Q567U6 631 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
CHRNA1-202ENST00000348749 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 GTF3C6Q969F1 213 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 HIP1O00291 1037 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms