RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 ZRANB2O95218 330 aaKnown RBP eCLIP19.08■□□□□ 0.65
MBD1-204ENST00000347968 SMC1AQ14683 1233 aaKnown RBP19.08■□□□□ 0.65
MBD1-204ENST00000347968 HOMER1Q86YM7 354 aa19.08■□□□□ 0.65
MBD1-204ENST00000347968 ZFYVE9O95405 1425 aa19.08■□□□□ 0.64
MBD1-204ENST00000347968 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.64
MBD1-204ENST00000347968 TTC31Q49AM3 519 aaPredicted RBP19.08■□□□□ 0.64
MBD1-204ENST00000347968 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.642e-7■■■■□ 20.3
MBD1-204ENST00000347968 ATP10DQ9P241 1426 aa19.08■□□□□ 0.64
MBD1-204ENST00000347968 MSH6P52701 1360 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 PIK3R4Q99570 1358 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 GPS2Q13227 327 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 GNL2Q13823 731 aaKnown RBP19.07■□□□□ 0.64
MBD1-204ENST00000347968 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 CNPY4Q8N129 248 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
MBD1-204ENST00000347968 BICD2Q8TD16 824 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 DNAI1Q9UI46 699 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
MBD1-204ENST00000347968 CEBPZQ03701 1054 aaKnown RBP19.06■□□□□ 0.64
MBD1-204ENST00000347968 FAM212AQ96EL1 285 aa19.06■□□□□ 0.64
MBD1-204ENST00000347968 ORC3Q9UBD5 711 aaPredicted RBP19.06■□□□□ 0.64
MBD1-204ENST00000347968 CARD6Q9BX69 1037 aa19.06■□□□□ 0.64
MBD1-204ENST00000347968 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
MBD1-204ENST00000347968 TNRQ92752 1358 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 F6X3S4 739 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 FAM193AP78312 1265 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 DNAJC21Q5F1R6 531 aaKnown RBP19.05■□□□□ 0.64
MBD1-204ENST00000347968 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
MBD1-204ENST00000347968 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 MNS1Q8NEH6 495 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 FBXO18Q8NFZ0 1043 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
MBD1-204ENST00000347968 ADAM21Q9UKJ8 722 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 LIMCH1Q9UPQ0 1083 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 SNX14Q9Y5W7 946 aa19.05■□□□□ 0.64
MBD1-204ENST00000347968 URI1O94763 535 aaPredicted RBP19.04■□□□□ 0.64
MBD1-204ENST00000347968 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
MBD1-204ENST00000347968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.04■□□□□ 0.64
MBD1-204ENST00000347968 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
MBD1-204ENST00000347968 PTPRMP28827 1452 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 ANAPC15P60006 121 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 GOLGA6L1Q8N7Z2 621 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 PPP1R13BQ96KQ4 1090 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 ARGLU1Q9NWB6 273 aaPredicted RBP19.04■□□□□ 0.64
MBD1-204ENST00000347968 A0A1B0GUL7 405 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 TCEANC2Q96MN5 208 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
MBD1-204ENST00000347968 H3BQF6 201 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 KRT85P78386 507 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 PTPN21Q16825 1174 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 CDK19Q9BWU1 502 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 METP08581 1390 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 BECN2A8MW95 431 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
MBD1-204ENST00000347968 TTLL5Q6EMB2 1281 aa19.03■□□□□ 0.64
MBD1-204ENST00000347968 LARP1BQ659C4 914 aaKnown RBP19.02■□□□□ 0.64
MBD1-204ENST00000347968 SPATA32Q96LK8 384 aa19.02■□□□□ 0.64
MBD1-204ENST00000347968 CLGNO14967 610 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 RNF20Q5VTR2 975 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 GOLGA5Q8TBA6 731 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 ZSWIM4Q9H7M6 989 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 L2HGDHQ9H9P8 463 aa19.02■□□□□ 0.63
MBD1-204ENST00000347968 GNAI3P08754 354 aa19.01■□□□□ 0.63
MBD1-204ENST00000347968 HSPA4P34932 840 aa19.01■□□□□ 0.63
MBD1-204ENST00000347968 FOSBP53539 338 aa19.01■□□□□ 0.63
MBD1-204ENST00000347968 VPS18Q9P253 973 aa19.01■□□□□ 0.63
MBD1-204ENST00000347968 EVCP57679 992 aa19■□□□□ 0.63
MBD1-204ENST00000347968 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
MBD1-204ENST00000347968 AK7Q96M32 723 aa19■□□□□ 0.63
MBD1-204ENST00000347968 TTC14Q96N46 770 aa19■□□□□ 0.63
MBD1-204ENST00000347968 EIF3CLB5ME19 914 aaKnown RBP19■□□□□ 0.63
MBD1-204ENST00000347968 ST3GAL1Q11201 340 aa19■□□□□ 0.63
MBD1-204ENST00000347968 ADCK5Q3MIX3 580 aa19■□□□□ 0.63
MBD1-204ENST00000347968 ISM2Q6H9L7 571 aa19■□□□□ 0.63
MBD1-204ENST00000347968 CTR9Q6PD62 1173 aa19■□□□□ 0.63
MBD1-204ENST00000347968 EIF3CQ99613 913 aaKnown RBP19■□□□□ 0.63
MBD1-204ENST00000347968 CABP1Q9NZU7 370 aa19■□□□□ 0.63
MBD1-204ENST00000347968 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
MBD1-204ENST00000347968 FANCGO15287 622 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 GNAI1P63096 354 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 CLSTN2Q9H4D0 955 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 DEF6Q9H4E7 631 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 CWC27Q6UX04 472 aaKnown RBP18.99■□□□□ 0.63
MBD1-204ENST00000347968 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 PHACTR2O75167 634 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 ATP2B1P20020 1258 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 LTKP29376 864 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 IQCB1Q15051 598 aa18.99■□□□□ 0.63
MBD1-204ENST00000347968 PATL2C9JE40 543 aaKnown RBP18.98■□□□□ 0.63
MBD1-204ENST00000347968 ACTN2P35609 894 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 GOLGA8FQ08AF8 430 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 GOLGA8DPQ0D2H9 430 aa18.98■□□□□ 0.63
MBD1-204ENST00000347968 CC2D1AQ6P1N0 951 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms