RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
NUP50-201ENST00000347635 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 STX1AQ16623 288 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 CTDP1Q9Y5B0 961 aaPredicted RBP17.24■□□□□ 0.35
NUP50-201ENST00000347635 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 HSP90B2PQ58FF3 399 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
NUP50-201ENST00000347635 DACH1Q9UI36 760 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 CHL1O00533 1208 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 CAVIN2O95810 425 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 CHPF2Q9P2E5 772 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 CDKL5O76039 1030 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 G2E3Q7L622 706 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 KIF18AQ8NI77 898 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
NUP50-201ENST00000347635 KIF1BO60333 1816 aa17.23■□□□□ 0.35
NUP50-201ENST00000347635 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.35
NUP50-201ENST00000347635 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
NUP50-201ENST00000347635 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
NUP50-201ENST00000347635 FILIP1LQ4L180 1135 aa17.22■□□□□ 0.35
NUP50-201ENST00000347635 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
NUP50-201ENST00000347635 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
NUP50-201ENST00000347635 MAP3K5Q99683 1374 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 TERF1P54274 439 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 DDB1Q16531 1140 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 EYA1Q99502 592 aa17.21■□□□□ 0.35
NUP50-201ENST00000347635 SMARCE1Q969G3 411 aa17.21■□□□□ 0.34
NUP50-201ENST00000347635 CWC15Q9P013 229 aaKnown RBP17.21■□□□□ 0.34
NUP50-201ENST00000347635 SLAIN2Q9P270 581 aa17.21■□□□□ 0.34
NUP50-201ENST00000347635 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.34
NUP50-201ENST00000347635 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
NUP50-201ENST00000347635 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
NUP50-201ENST00000347635 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 AOX1Q06278 1338 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 ANXA1P04083 346 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 SYT1P21579 422 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 FAM177A1Q8N128 213 aaPredicted RBP17.2■□□□□ 0.34
NUP50-201ENST00000347635 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
NUP50-201ENST00000347635 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 GSDMDP57764 484 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 TMEM63CQ9P1W3 806 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 CD2BP2O95400 341 aaKnown RBP17.19■□□□□ 0.34
NUP50-201ENST00000347635 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 DACT1Q9NYF0 836 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 KIAA0232Q92628 1395 aa17.19■□□□□ 0.34
NUP50-201ENST00000347635 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 CEP135Q66GS9 1140 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 TRMT1Q9NXH9 659 aaKnown RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 UBXN4Q92575 508 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 PPFIBP1Q86W92 1011 aa17.18■□□□□ 0.34
NUP50-201ENST00000347635 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
NUP50-201ENST00000347635 CCT2P78371 535 aaKnown RBP17.17■□□□□ 0.34
NUP50-201ENST00000347635 TYRO3Q06418 890 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 TAF3Q5VWG9 929 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
NUP50-201ENST00000347635 BRD1O95696 1058 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
NUP50-201ENST00000347635 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
NUP50-201ENST00000347635 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
NUP50-201ENST00000347635 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
NUP50-201ENST00000347635 PKP1Q13835 747 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 AK7Q96M32 723 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
NUP50-201ENST00000347635 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 CREB3L3Q68CJ9 461 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 C8orf37Q96NL8 207 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 GADD45BO75293 160 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms