RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
SMG7-201ENST00000347615 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
SMG7-201ENST00000347615 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 APOBRQ0VD83 1088 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 STX1AQ16623 288 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 NAPBQ9H115 298 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 IFIT3O14879 490 aaKnown RBP12.18□□□□□ -0.46
SMG7-201ENST00000347615 SYT1P21579 422 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
SMG7-201ENST00000347615 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
SMG7-201ENST00000347615 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
SMG7-201ENST00000347615 AFMP43652 599 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 TYRO3Q06418 890 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 TRMT1LQ7Z2T5 733 aaKnown RBP12.18□□□□□ -0.46
SMG7-201ENST00000347615 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 SLC26A6Q9BXS9 759 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 CDKL5O76039 1030 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 PHF8Q9UPP1 1060 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 SLC12A7Q9Y666 1083 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 WDR62O43379 1518 aa12.18□□□□□ -0.46
SMG7-201ENST00000347615 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
SMG7-201ENST00000347615 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
SMG7-201ENST00000347615 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 TMEM63CQ9P1W3 806 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 DNAI1Q9UI46 699 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 NSD2O96028 1365 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■■■■ 32.1
SMG7-201ENST00000347615 PIK3R4Q99570 1358 aa12.17□□□□□ -0.46
SMG7-201ENST00000347615 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
SMG7-201ENST00000347615 GNG11P61952 73 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 IFIT5Q13325 482 aaKnown RBP12.16□□□□□ -0.46
SMG7-201ENST00000347615 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
SMG7-201ENST00000347615 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 ODF2Q5BJF6 829 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 HYPKQ9NX55 129 aa12.16□□□□□ -0.46
SMG7-201ENST00000347615 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
SMG7-201ENST00000347615 PPARDQ03181 441 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 EYA1Q99502 592 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
SMG7-201ENST00000347615 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
SMG7-201ENST00000347615 ITSN2Q9NZM3 1697 aa12.15□□□□□ -0.47
SMG7-201ENST00000347615 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.47
SMG7-201ENST00000347615 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.47
SMG7-201ENST00000347615 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.47
SMG7-201ENST00000347615 PALD1Q9ULE6 856 aa12.15□□□□□ -0.47
SMG7-201ENST00000347615 ERLIN1O75477 346 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.477e-17■■■■■ 49.3
SMG7-201ENST00000347615 LMAN1P49257 510 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
SMG7-201ENST00000347615 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
SMG7-201ENST00000347615 GNL3LQ9NVN8 582 aaKnown RBP12.14□□□□□ -0.47
SMG7-201ENST00000347615 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 TFCP2Q12800 502 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 VAT1LQ9HCJ6 419 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
SMG7-201ENST00000347615 METAP2P50579 478 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMG7-201ENST00000347615 UBASH3AP57075 661 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 STIM1Q13586 685 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
SMG7-201ENST00000347615 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
SMG7-201ENST00000347615 KIF5CO60282 957 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 KARSQ15046 597 aaKnown RBP12.13□□□□□ -0.47
SMG7-201ENST00000347615 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 GPIHBP1Q8IV16 184 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 MCM5P33992 734 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 RBM5P52756 815 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMG7-201ENST00000347615 STX17P56962 302 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 HELBQ8NG08 1087 aaPredicted RBP12.13□□□□□ -0.47
SMG7-201ENST00000347615 MEX3CQ5U5Q3 659 aaKnown RBP12.13□□□□□ -0.47
SMG7-201ENST00000347615 SYT10Q6XYQ8 523 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 DRC1Q96MC2 740 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 GRM8O00222 908 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 ZSCAN12O43309 604 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 IARSP41252 1262 aaKnown RBP12.13□□□□□ -0.47
SMG7-201ENST00000347615 SPECC1Q5M775 1068 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
SMG7-201ENST00000347615 KIAA0556O60303 1618 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms