RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 KIF1BPQ96EK5 621 aa18.25■□□□□ 0.51
CTTN-202ENST00000346329 AFF2P51816 1311 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 TRIM37O94972 964 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 ADORA1P30542 326 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
CTTN-202ENST00000346329 NEK4P51957 841 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 GREM2Q9H772 168 aa18.24■□□□□ 0.51
CTTN-202ENST00000346329 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
CTTN-202ENST00000346329 AAMPQ13685 434 aa18.23■□□□□ 0.51
CTTN-202ENST00000346329 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
CTTN-202ENST00000346329 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
CTTN-202ENST00000346329 GOLIM4O00461 696 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 GNPATO15228 680 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 CNNM1Q9NRU3 951 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
CTTN-202ENST00000346329 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
CTTN-202ENST00000346329 BECN1Q14457 450 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
CTTN-202ENST00000346329 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
CTTN-202ENST00000346329 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
CTTN-202ENST00000346329 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
CTTN-202ENST00000346329 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
CTTN-202ENST00000346329 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
CTTN-202ENST00000346329 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
CTTN-202ENST00000346329 HOXB7P09629 217 aa18.2■□□□□ 0.5
CTTN-202ENST00000346329 DBNLQ9UJU6 430 aaKnown RBP18.2■□□□□ 0.5
CTTN-202ENST00000346329 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
CTTN-202ENST00000346329 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
CTTN-202ENST00000346329 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
CTTN-202ENST00000346329 PKP1Q13835 747 aa18.19■□□□□ 0.5
CTTN-202ENST00000346329 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
CTTN-202ENST00000346329 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
CTTN-202ENST00000346329 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
CTTN-202ENST00000346329 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
CTTN-202ENST00000346329 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
CTTN-202ENST00000346329 CHMLP26374 656 aa18.18■□□□□ 0.5
CTTN-202ENST00000346329 PTH1RQ03431 593 aa18.18■□□□□ 0.5
CTTN-202ENST00000346329 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
CTTN-202ENST00000346329 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
CTTN-202ENST00000346329 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
CTTN-202ENST00000346329 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
CTTN-202ENST00000346329 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CTTN-202ENST00000346329 STK3Q13188 491 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 MSL1Q68DK7 614 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.17■□□□□ 0.5
CTTN-202ENST00000346329 POLA2Q14181 598 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 METTL24Q5JXM2 366 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 SPATA31A5Q5VU36 1347 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 SPATA31A7Q8IWB4 1347 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 ERC2O15083 957 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
CTTN-202ENST00000346329 ITGA6P23229 1130 aa18.16■□□□□ 0.5
CTTN-202ENST00000346329 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
CTTN-202ENST00000346329 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
CTTN-202ENST00000346329 HAND2P61296 217 aa18.16■□□□□ 0.5
CTTN-202ENST00000346329 KIF2CQ99661 725 aa18.16■□□□□ 0.5
CTTN-202ENST00000346329 ECHDC1Q9NTX5 307 aa18.16■□□□□ 0.5
CTTN-202ENST00000346329 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 UBN2Q6ZU65 1347 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 A0A0D9SFI3 127 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
CTTN-202ENST00000346329 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 FOXO4P98177 505 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 SCARF1Q14162 830 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 RASEFQ8IZ41 740 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
CTTN-202ENST00000346329 WASHC4Q2M389 1173 aa18.15■□□□□ 0.5
CTTN-202ENST00000346329 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
CTTN-202ENST00000346329 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
CTTN-202ENST00000346329 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
CTTN-202ENST00000346329 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
CTTN-202ENST00000346329 A0A1B0GUL7 405 aa18.13■□□□□ 0.49
CTTN-202ENST00000346329 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
CTTN-202ENST00000346329 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
CTTN-202ENST00000346329 COL18A1P39060 1754 aa18.12■□□□□ 0.49
CTTN-202ENST00000346329 INTS5Q6P9B9 1019 aaKnown RBP18.12■□□□□ 0.49
CTTN-202ENST00000346329 CNTROBQ8N137 903 aa18.12■□□□□ 0.49
CTTN-202ENST00000346329 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
CTTN-202ENST00000346329 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
CTTN-202ENST00000346329 IDH1O75874 414 aaKnown RBP18.11■□□□□ 0.49
CTTN-202ENST00000346329 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
CTTN-202ENST00000346329 ADCK5Q3MIX3 580 aa18.11■□□□□ 0.49
CTTN-202ENST00000346329 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
CTTN-202ENST00000346329 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
CTTN-202ENST00000346329 MAP3K15Q6ZN16 1313 aa18.11■□□□□ 0.49
CTTN-202ENST00000346329 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
CTTN-202ENST00000346329 NECAB1Q8N987 351 aa18.1■□□□□ 0.49
CTTN-202ENST00000346329 ERFEQ4G0M1 354 aa18.1■□□□□ 0.49
CTTN-202ENST00000346329 GIGYF2Q6Y7W6 1299 aaKnown RBP18.1■□□□□ 0.49
CTTN-202ENST00000346329 FAM208AQ9UK61 1670 aaKnown RBP18.1■□□□□ 0.49
CTTN-202ENST00000346329 SSFA2P28290 1259 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms