RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 CEP89Q96ST8 783 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 EYA1Q99502 592 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
SRPK1-201ENST00000346162 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
SRPK1-201ENST00000346162 ZBTB7BO15156 539 aaPredicted RBP17.98■□□□□ 0.47
SRPK1-201ENST00000346162 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
SRPK1-201ENST00000346162 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 ARFGAP3Q9NP61 516 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 DYDC1Q8WWB3 177 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 IFIT5Q13325 482 aaKnown RBP17.97■□□□□ 0.47
SRPK1-201ENST00000346162 BANK1Q8NDB2 785 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
SRPK1-201ENST00000346162 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
SRPK1-201ENST00000346162 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 FILIP1LQ4L180 1135 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 IL13P35225 146 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 NF2P35240 595 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 ZNF165P49910 485 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 ZNF445P59923 1031 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
SRPK1-201ENST00000346162 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
SRPK1-201ENST00000346162 NAP1L1P55209 391 aaKnown RBP17.95■□□□□ 0.46
SRPK1-201ENST00000346162 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 ANKRD13DQ6ZTN6 518 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
SRPK1-201ENST00000346162 TXLNAP40222 546 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 STX6O43752 255 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
SRPK1-201ENST00000346162 PLEKHM2Q8IWE5 1019 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 GOLGA6L7A0A1B0GV03 622 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
SRPK1-201ENST00000346162 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
SRPK1-201ENST00000346162 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
SRPK1-201ENST00000346162 SKILP12757 684 aa17.94■□□□□ 0.46
SRPK1-201ENST00000346162 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
SRPK1-201ENST00000346162 UBE2HP62256 183 aa17.94■□□□□ 0.46
SRPK1-201ENST00000346162 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
SRPK1-201ENST00000346162 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-201ENST00000346162 MCM6Q14566 821 aa17.93■□□□□ 0.46
SRPK1-201ENST00000346162 RNF187Q5TA31 235 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-201ENST00000346162 ALDH1L1O75891 902 aa17.93■□□□□ 0.46
SRPK1-201ENST00000346162 PTGS1P23219 599 aa17.93■□□□□ 0.46
SRPK1-201ENST00000346162 CASQ1P31415 396 aa17.93■□□□□ 0.46
SRPK1-201ENST00000346162 MYCBPQ99417 103 aaPredicted RBP17.93■□□□□ 0.46
SRPK1-201ENST00000346162 GJB2P29033 226 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 ANAPC15P60006 121 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 GOLIM4O00461 696 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 GSDMDP57764 484 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 SLC39A6Q13433 755 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.464e-6■■■□□ 17.3
SRPK1-201ENST00000346162 CADPS2Q86UW7 1296 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 COPS6Q7L5N1 327 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 PPFIBP1Q86W92 1011 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 LRRC59Q96AG4 307 aaKnown RBP17.92■□□□□ 0.46
SRPK1-201ENST00000346162 TCEAL9Q9UHQ7 104 aa17.92■□□□□ 0.46
SRPK1-201ENST00000346162 GRM8O00222 908 aa17.91■□□□□ 0.46
SRPK1-201ENST00000346162 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
SRPK1-201ENST00000346162 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
SRPK1-201ENST00000346162 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
SRPK1-201ENST00000346162 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
SRPK1-201ENST00000346162 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
SRPK1-201ENST00000346162 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
SRPK1-201ENST00000346162 MAGI2Q86UL8 1455 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 CAVIN2O95810 425 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 KCNA6P17658 529 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 KIF4BQ2VIQ3 1234 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 CTDP1Q9Y5B0 961 aaPredicted RBP17.9■□□□□ 0.46
SRPK1-201ENST00000346162 EDC4Q6P2E9 1401 aaKnown RBP17.9■□□□□ 0.46
SRPK1-201ENST00000346162 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 GPTP24298 496 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 C8orf76Q96K31 380 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 ABCA8O94911 1581 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 FAM200AQ8TCP9 573 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 ANO10Q9NW15 660 aa17.9■□□□□ 0.46
SRPK1-201ENST00000346162 WASF1Q92558 559 aa17.89■□□□□ 0.45
SRPK1-201ENST00000346162 NAPBQ9H115 298 aa17.89■□□□□ 0.45
SRPK1-201ENST00000346162 ZNF213O14771 459 aa17.89■□□□□ 0.45
SRPK1-201ENST00000346162 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
SRPK1-201ENST00000346162 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
SRPK1-201ENST00000346162 DACH1Q9UI36 760 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms