RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.28
CKLF-202ENST00000345436 NTSR2O95665 410 aa23.07■■□□□ 1.28
CKLF-202ENST00000345436 ANXA1P04083 346 aa23.07■■□□□ 1.28
CKLF-202ENST00000345436 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
CKLF-202ENST00000345436 CRAMP1Q96RY5 1269 aa23.07■■□□□ 1.28
CKLF-202ENST00000345436 RIC1Q4ADV7 1423 aa23.07■■□□□ 1.28
CKLF-202ENST00000345436 ANP32CO43423 234 aa23.06■■□□□ 1.28
CKLF-202ENST00000345436 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
CKLF-202ENST00000345436 SLC10A5Q5PT55 438 aa23.06■■□□□ 1.28
CKLF-202ENST00000345436 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
CKLF-202ENST00000345436 COL11A2P13942 1736 aaPredicted RBP23.05■■□□□ 1.28
CKLF-202ENST00000345436 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
CKLF-202ENST00000345436 MBIPQ9NS73 344 aa23.05■■□□□ 1.28
CKLF-202ENST00000345436 CHPF2Q9P2E5 772 aa23.05■■□□□ 1.28
CKLF-202ENST00000345436 SLX4Q8IY92 1834 aa23.04■■□□□ 1.28
CKLF-202ENST00000345436 IQCA1LA6NCM1 817 aa23.04■■□□□ 1.28
CKLF-202ENST00000345436 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
CKLF-202ENST00000345436 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
CKLF-202ENST00000345436 NUP98P52948 1817 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 ABCC12Q96J65 1359 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 KRT24Q2M2I5 525 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 SYNE4Q8N205 404 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 JDP2Q8WYK2 163 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 PSMD1Q99460 953 aa23.03■■□□□ 1.28
CKLF-202ENST00000345436 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
CKLF-202ENST00000345436 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
CKLF-202ENST00000345436 ZNF853P0CG23 659 aa23.02■■□□□ 1.28
CKLF-202ENST00000345436 NLRP10Q86W26 655 aa23.02■■□□□ 1.28
CKLF-202ENST00000345436 ZNF277Q9NRM2 450 aaPredicted RBP23.02■■□□□ 1.28
CKLF-202ENST00000345436 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
CKLF-202ENST00000345436 FER1L6Q2WGJ9 1857 aa23.01■■□□□ 1.27
CKLF-202ENST00000345436 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
CKLF-202ENST00000345436 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
CKLF-202ENST00000345436 BBOX1O75936 387 aa23■■□□□ 1.27
CKLF-202ENST00000345436 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
CKLF-202ENST00000345436 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
CKLF-202ENST00000345436 ARFGEF2Q9Y6D5 1785 aa22.99■■□□□ 1.27
CKLF-202ENST00000345436 DDNO94850 711 aaPredicted RBP22.99■■□□□ 1.27
CKLF-202ENST00000345436 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
CKLF-202ENST00000345436 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
CKLF-202ENST00000345436 RIC3Q7Z5B4 369 aa22.98■■□□□ 1.27
CKLF-202ENST00000345436 SUPT20HQ8NEM7 779 aa22.98■■□□□ 1.27
CKLF-202ENST00000345436 VPS33BQ9H267 617 aa22.98■■□□□ 1.27
CKLF-202ENST00000345436 EIF6P56537 245 aaKnown RBP22.97■■□□□ 1.27
CKLF-202ENST00000345436 CCDC27Q2M243 656 aa22.97■■□□□ 1.27
CKLF-202ENST00000345436 CCDC30Q5VVM6 783 aa22.97■■□□□ 1.27
CKLF-202ENST00000345436 OLFM4Q6UX06 510 aa22.97■■□□□ 1.27
CKLF-202ENST00000345436 MRS2Q9HD23 443 aa22.97■■□□□ 1.27
CKLF-202ENST00000345436 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
CKLF-202ENST00000345436 DDX58O95786 925 aaKnown RBP22.96■■□□□ 1.27
CKLF-202ENST00000345436 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
CKLF-202ENST00000345436 TMC4Q7Z404 712 aa22.96■■□□□ 1.27
CKLF-202ENST00000345436 L3MBTL3Q96JM7 780 aaPredicted RBP22.96■■□□□ 1.27
CKLF-202ENST00000345436 ATP6V0A2Q9Y487 856 aa22.96■■□□□ 1.27
CKLF-202ENST00000345436 POTECB2RU33 542 aa22.95■■□□□ 1.26
CKLF-202ENST00000345436 ELL2O00472 640 aaPredicted RBP22.95■■□□□ 1.26
CKLF-202ENST00000345436 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
CKLF-202ENST00000345436 HCLS1P14317 486 aaPredicted RBP22.95■■□□□ 1.26
CKLF-202ENST00000345436 TRIM28Q13263 835 aaKnown RBP22.95■■□□□ 1.26
CKLF-202ENST00000345436 TIAM2Q8IVF5 1701 aa22.95■■□□□ 1.26
CKLF-202ENST00000345436 LARGE2Q8N3Y3 721 aa22.95■■□□□ 1.26
CKLF-202ENST00000345436 DICER1Q9UPY3 1922 aaKnown RBP22.94■■□□□ 1.26
CKLF-202ENST00000345436 FZD9O00144 591 aa22.94■■□□□ 1.26
CKLF-202ENST00000345436 CHADLQ6NUI6 762 aa22.94■■□□□ 1.26
CKLF-202ENST00000345436 ISCA1Q9BUE6 129 aa22.94■■□□□ 1.26
CKLF-202ENST00000345436 SP8Q8IXZ3 490 aa22.93■■□□□ 1.26
CKLF-202ENST00000345436 GPC2Q8N158 579 aa22.93■■□□□ 1.26
CKLF-202ENST00000345436 CACNA1SQ13698 1873 aa22.93■■□□□ 1.26
CKLF-202ENST00000345436 WDR90Q96KV7 1748 aa22.93■■□□□ 1.26
CKLF-202ENST00000345436 C3orf67Q6ZVT6 689 aa22.92■■□□□ 1.26
CKLF-202ENST00000345436 PNMA8AQ86V59 439 aaPredicted RBP22.92■■□□□ 1.26
CKLF-202ENST00000345436 NIM1KQ8IY84 436 aa22.92■■□□□ 1.26
CKLF-202ENST00000345436 DNAJC5GQ8N7S2 189 aa22.92■■□□□ 1.26
CKLF-202ENST00000345436 STK31Q9BXU1 1019 aa22.92■■□□□ 1.26
CKLF-202ENST00000345436 HACL1Q9UJ83 578 aa22.92■■□□□ 1.26
CKLF-202ENST00000345436 ABCC4O15439 1325 aa22.91■■□□□ 1.26
CKLF-202ENST00000345436 ATP5J2-PTCD1G3V325 749 aa22.91■■□□□ 1.26
CKLF-202ENST00000345436 GRAPQ13588 217 aa22.91■■□□□ 1.26
CKLF-202ENST00000345436 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
CKLF-202ENST00000345436 LDHDQ86WU2 507 aa22.91■■□□□ 1.26
CKLF-202ENST00000345436 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
CKLF-202ENST00000345436 MPNDQ8N594 471 aa22.9■■□□□ 1.26
CKLF-202ENST00000345436 C8orf58Q8NAV2 365 aa22.9■■□□□ 1.26
CKLF-202ENST00000345436 TAF1DQ9H5J8 278 aaPredicted RBP22.9■■□□□ 1.26
CKLF-202ENST00000345436 IL16Q14005 1332 aa22.89■■□□□ 1.26
CKLF-202ENST00000345436 PPIP5K2O43314 1243 aa22.89■■□□□ 1.25
CKLF-202ENST00000345436 LMOD1P29536 600 aaPredicted RBP22.89■■□□□ 1.25
CKLF-202ENST00000345436 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
CKLF-202ENST00000345436 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
CKLF-202ENST00000345436 FAM89AQ96GI7 184 aa22.89■■□□□ 1.25
CKLF-202ENST00000345436 ZNF541Q9H0D2 1346 aa22.88■■□□□ 1.25
CKLF-202ENST00000345436 SF3B3Q15393 1217 aaKnown RBP22.88■■□□□ 1.25
CKLF-202ENST00000345436 KLRG1Q96E93 195 aa22.88■■□□□ 1.25
CKLF-202ENST00000345436 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
CKLF-202ENST00000345436 GJA3Q9Y6H8 435 aa22.88■■□□□ 1.25
CKLF-202ENST00000345436 IRS4O14654 1257 aaPredicted RBP22.87■■□□□ 1.25
CKLF-202ENST00000345436 EPHX2P34913 555 aa22.87■■□□□ 1.25
CKLF-202ENST00000345436 ZBTB38Q8NAP3 1195 aaPredicted RBP22.87■■□□□ 1.25
CKLF-202ENST00000345436 CCDC191Q8NCU4 936 aa22.87■■□□□ 1.25
CKLF-202ENST00000345436 RTFDC1Q9BY42 306 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms