RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CBX8Q9HC52 389 aa21.14■□□□□ 0.98
VHL-202ENST00000345392 GLRX3O76003 335 aaKnown RBP21.14■□□□□ 0.97
VHL-202ENST00000345392 NAA30Q147X3 362 aaPredicted RBP21.13■□□□□ 0.97
VHL-202ENST00000345392 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
VHL-202ENST00000345392 TNMDQ9H2S6 317 aa21.13■□□□□ 0.97
VHL-202ENST00000345392 KCNJ4P48050 445 aa21.13■□□□□ 0.97
VHL-202ENST00000345392 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
VHL-202ENST00000345392 TRIM5Q9C035 493 aa21.13■□□□□ 0.97
VHL-202ENST00000345392 CHPF2Q9P2E5 772 aa21.13■□□□□ 0.97
VHL-202ENST00000345392 PI4KAP2A4QPH2 592 aa21.12■□□□□ 0.97
VHL-202ENST00000345392 PI4KAP1Q8N8J0 262 aa21.12■□□□□ 0.97
VHL-202ENST00000345392 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
VHL-202ENST00000345392 NECTIN1Q15223 517 aa21.12■□□□□ 0.97
VHL-202ENST00000345392 GOLGA6L4A6NEF3 574 aa21.12■□□□□ 0.97
VHL-202ENST00000345392 RBM8AQ9Y5S9 174 aaKnown RBP21.12■□□□□ 0.97
VHL-202ENST00000345392 NWD1Q149M9 1564 aa21.11■□□□□ 0.97
VHL-202ENST00000345392 ZKSCAN1P17029 563 aaPredicted RBP21.11■□□□□ 0.97
VHL-202ENST00000345392 CLASRPQ8N2M8 674 aaKnown RBP21.11■□□□□ 0.97
VHL-202ENST00000345392 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
VHL-202ENST00000345392 TM6SF1Q9BZW5 370 aa21.11■□□□□ 0.97
VHL-202ENST00000345392 PA2G4Q9UQ80 394 aaKnown RBP21.11■□□□□ 0.97
VHL-202ENST00000345392 BEND3Q5T5X7 828 aa21.1■□□□□ 0.97
VHL-202ENST00000345392 CREB3L3Q68CJ9 461 aa21.1■□□□□ 0.97
VHL-202ENST00000345392 TTC41PQ6P2S7 1318 aa21.1■□□□□ 0.97
VHL-202ENST00000345392 TNNT1P13805 278 aa21.1■□□□□ 0.97
VHL-202ENST00000345392 LRRC59Q96AG4 307 aaKnown RBP21.1■□□□□ 0.97
VHL-202ENST00000345392 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
VHL-202ENST00000345392 ARHGAP23Q9P227 1491 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 STK3Q13188 491 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 NBPF6Q5VWK0 638 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 ZSCAN25Q6NSZ9 544 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 SPATA32Q96LK8 384 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 NBPF4Q96M43 638 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 PXDNLA1KZ92 1463 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 SLIT1O75093 1534 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 LRRC37A3O60309 1634 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
VHL-202ENST00000345392 ZNF75DP51815 510 aa21.08■□□□□ 0.97
VHL-202ENST00000345392 LARP1Q6PKG0 1096 aaKnown RBP21.08■□□□□ 0.97
VHL-202ENST00000345392 KLHL34Q8N239 644 aa21.08■□□□□ 0.97
VHL-202ENST00000345392 TAF6LQ9Y6J9 622 aa21.08■□□□□ 0.97
VHL-202ENST00000345392 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.97
VHL-202ENST00000345392 NR1I2O75469 434 aa21.08■□□□□ 0.96
VHL-202ENST00000345392 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.96
VHL-202ENST00000345392 DNAJC25Q9H1X3 360 aa21.08■□□□□ 0.96
VHL-202ENST00000345392 IFIT2P09913 472 aaKnown RBP21.07■□□□□ 0.96
VHL-202ENST00000345392 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
VHL-202ENST00000345392 KCNB2Q92953 911 aa21.07■□□□□ 0.96
VHL-202ENST00000345392 USP42Q9H9J4 1324 aaKnown RBP21.07■□□□□ 0.96
VHL-202ENST00000345392 KIF20AO95235 890 aa21.07■□□□□ 0.96
VHL-202ENST00000345392 PLA2G4DQ86XP0 818 aa21.07■□□□□ 0.96
VHL-202ENST00000345392 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
VHL-202ENST00000345392 ELP1O95163 1332 aa21.07■□□□□ 0.96
VHL-202ENST00000345392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.06■□□□□ 0.96
VHL-202ENST00000345392 ZNF592Q92610 1267 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 SMTNL1A8MU46 457 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 ZNF165P49910 485 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
VHL-202ENST00000345392 CCDC144BQ3MJ40 725 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 CCDC144CPQ8IYA2 1237 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 LEO1Q8WVC0 666 aaPredicted RBP21.06■□□□□ 0.96
VHL-202ENST00000345392 CLIP2Q9UDT6 1046 aa21.06■□□□□ 0.96
VHL-202ENST00000345392 SLC27A2O14975 620 aa21.05■□□□□ 0.96
VHL-202ENST00000345392 EIF4A1P60842 406 aaKnown RBP21.05■□□□□ 0.96
VHL-202ENST00000345392 TPD52L1Q16890 204 aaPredicted RBP21.05■□□□□ 0.96
VHL-202ENST00000345392 AACSQ86V21 672 aa21.05■□□□□ 0.96
VHL-202ENST00000345392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.05■□□□□ 0.96
VHL-202ENST00000345392 BICD2Q8TD16 824 aa21.05■□□□□ 0.96
VHL-202ENST00000345392 SCAND2PQ9GZW5 306 aaPredicted RBP21.05■□□□□ 0.96
VHL-202ENST00000345392 CACNA1FO60840 1977 aa21.05■□□□□ 0.96
VHL-202ENST00000345392 LMTK3Q96Q04 1460 aa21.05■□□□□ 0.96
VHL-202ENST00000345392 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 MAP4K1Q92918 833 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 EVI5LQ96CN4 794 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 PDCP20941 246 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 PGBD1Q96JS3 809 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 FEZ1Q99689 392 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 CLSTN2Q9H4D0 955 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 PODXL2Q9NZ53 605 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
VHL-202ENST00000345392 OGFRQ9NZT2 677 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 A0A0U1RQG5 324 aaPredicted RBP21.03■□□□□ 0.96
VHL-202ENST00000345392 ARID5BQ14865 1188 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 PROSER3Q2NL68 480 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 BLOC1S2Q6QNY1 142 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 CCDC112Q8NEF3 446 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 DDX11Q96FC9 970 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 CCDC8Q9H0W5 538 aaPredicted RBP21.03■□□□□ 0.96
VHL-202ENST00000345392 DDX19AQ9NUU7 478 aaKnown RBP21.03■□□□□ 0.96
VHL-202ENST00000345392 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
VHL-202ENST00000345392 MARF1Q9Y4F3 1742 aaKnown RBP21.03■□□□□ 0.96
VHL-202ENST00000345392 TDRD7Q8NHU6 1098 aaKnown RBP21.02■□□□□ 0.96
VHL-202ENST00000345392 GPATCH3Q96I76 525 aa21.02■□□□□ 0.96
VHL-202ENST00000345392 A0A0D9SFI3 127 aa21.02■□□□□ 0.96
VHL-202ENST00000345392 PSMA5P28066 241 aa21.02■□□□□ 0.96
VHL-202ENST00000345392 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.96
VHL-202ENST00000345392 TOB2Q14106 344 aaPredicted RBP21.01■□□□□ 0.95
VHL-202ENST00000345392 JAK2O60674 1132 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms