RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TMCO4Q5TGY1 634 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TEKT1Q969V4 418 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 HOOK2Q96ED9 719 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 PRC1O43663 620 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 DIAPH1O60610 1272 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 IMPDH2P12268 514 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 ADCY2Q08462 1091 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CAPZA3Q96KX2 299 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MRPL11Q9Y3B7 192 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 FNTAP49354 379 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MCCD1P59942 119 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 THOC1Q96FV9 657 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 VCX3AQ9NNX9 186 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CYP2C19P33261 490 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 HARSP12081 509 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 NMIQ13287 307 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TNIP1Q15025 636 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC121Q6ZUS5 278 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TBC1D32Q96NH3 1257 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TRPV5Q9NQA5 729 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CLCN2P51788 898 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 DHTKD1Q96HY7 919 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TARSL2A2RTX5 802 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CLNS1AP54105 237 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MICALL1Q8N3F8 863 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 CACTIN-AS1Q8N1I8 211 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MGEA5O60502 916 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 ALS2CR12Q96Q35 445 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 NOLC1Q14978 699 aaKnown RBP eCLIP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SAAL1Q96ER3 474 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 ZSCAN12O43309 604 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SEPT2Q15019 361 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 TMX1Q9H3N1 280 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 DDR1Q08345 913 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 DTNBO60941 627 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MRPL12P52815 198 aaKnown RBP4.31□□□□□ -1.72
SYNE2-202ENST00000344113 SAMD3Q8N6K7 520 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 FBXO18Q8NFZ0 1043 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 RPGRIP1Q96KN7 1286 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 KCND1Q9NSA2 647 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 MTUS1Q9ULD2 1270 aa4.31□□□□□ -1.72
SYNE2-202ENST00000344113 FBF1Q8TES7 1133 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 SPECC1L-ADORA2AF8WAN1 911 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 VCAM1P19320 739 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 PTPN14Q15678 1187 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 SESTD1Q86VW0 696 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 TAOK3Q9H2K8 898 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 SSBP05455 408 aaKnown RBP eCLIP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CAMK4Q16566 473 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC150Q8NCX0 1101 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 THRAP3Q9Y2W1 955 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 IL16Q14005 1332 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 BAZ2BQ9UIF8 2168 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 RIPK4P57078 832 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CFAP58Q5T655 872 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 LRRC45Q96CN5 670 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 WDR70Q9NW82 654 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC151A5D8V7 595 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 BRD3Q15059 726 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 LRRC49Q8IUZ0 686 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CACTINQ8WUQ7 758 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 ODF2LQ9ULJ1 636 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 LMAN1P49257 510 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 RASSF2P50749 326 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC125Q86Z20 511 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 MIS18AQ9NYP9 233 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CKAP4Q07065 602 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC96Q2M329 555 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 ARFGAP2Q8N6H7 521 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 H3BQV1 296 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 IFFO2Q5TF58 517 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 RBM12BQ8IXT5 1001 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 ARHGAP24Q8N264 748 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 BIN2Q9UBW5 565 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CREB3O43889 395 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 SMARCA2P51531 1590 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 IRX4P78413 519 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 BIRC5O15392 142 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 KDM1AO60341 852 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CPLX2Q6PUV4 134 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 Q9H521 79 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 EXOC5O00471 708 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 MECOMQ03112 1051 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 CTAGE6Q86UF2 777 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 SP100P23497 879 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 RANBP17Q9H2T7 1088 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 PRM3Q9NNZ6 103 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 ACTN2P35609 894 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 YTHDF3Q7Z739 585 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 OPTNQ96CV9 577 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 FOXD4L1Q9NU39 408 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 IDO1P14902 403 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 MVPQ14764 893 aaKnown RBP4.3□□□□□ -1.72
SYNE2-202ENST00000344113 NEUROD2Q15784 382 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 LRSAM1Q6UWE0 723 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 A0A1B0GW55 424 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 DUX4L2P0CJ85 424 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 DUX4L3P0CJ86 424 aa4.3□□□□□ -1.72
SYNE2-202ENST00000344113 DUX4L4P0CJ87 422 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms