RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 NLRP3Q96P20 1036 aa15.9■□□□□ 0.14
PDCD1-202ENST00000343705 UTP14AQ9BVJ6 771 aaKnown RBP15.9■□□□□ 0.14
PDCD1-202ENST00000343705 CHPF2Q9P2E5 772 aa15.9■□□□□ 0.14
PDCD1-202ENST00000343705 NTSR2O95665 410 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 ANXA1P04083 346 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 HOXA10P31260 410 aaPredicted RBP15.89■□□□□ 0.13
PDCD1-202ENST00000343705 CCDC184Q52MB2 194 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
PDCD1-202ENST00000343705 PLBD2Q8NHP8 589 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 C7orf43Q8WVR3 580 aa15.89■□□□□ 0.13
PDCD1-202ENST00000343705 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
PDCD1-202ENST00000343705 SENP3-EIF4A1A0A087X0R7 540 aa15.88■□□□□ 0.13
PDCD1-202ENST00000343705 GLTPD2A6NH11 291 aa15.88■□□□□ 0.13
PDCD1-202ENST00000343705 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
PDCD1-202ENST00000343705 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
PDCD1-202ENST00000343705 IL16Q14005 1332 aa15.88■□□□□ 0.13
PDCD1-202ENST00000343705 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
PDCD1-202ENST00000343705 CCDC30Q5VVM6 783 aa15.87■□□□□ 0.13
PDCD1-202ENST00000343705 WWC1Q8IX03 1113 aa15.87■□□□□ 0.13
PDCD1-202ENST00000343705 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
PDCD1-202ENST00000343705 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
PDCD1-202ENST00000343705 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
PDCD1-202ENST00000343705 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDCD1-202ENST00000343705 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
PDCD1-202ENST00000343705 NMRK2Q9NPI5 230 aa15.86■□□□□ 0.13
PDCD1-202ENST00000343705 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
PDCD1-202ENST00000343705 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
PDCD1-202ENST00000343705 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
PDCD1-202ENST00000343705 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
PDCD1-202ENST00000343705 DDX58O95786 925 aaKnown RBP15.84■□□□□ 0.13
PDCD1-202ENST00000343705 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
PDCD1-202ENST00000343705 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
PDCD1-202ENST00000343705 HSPA6P17066 643 aa15.84■□□□□ 0.13
PDCD1-202ENST00000343705 PRELPP51888 382 aa15.84■□□□□ 0.13
PDCD1-202ENST00000343705 TRIM28Q13263 835 aaKnown RBP15.84■□□□□ 0.13
PDCD1-202ENST00000343705 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
PDCD1-202ENST00000343705 CACNA1FO60840 1977 aa15.84■□□□□ 0.13
PDCD1-202ENST00000343705 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
PDCD1-202ENST00000343705 FSTL1Q12841 308 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 PSMD1Q99460 953 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 ISCA1Q9BUE6 129 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 RRAGCQ9HB90 399 aa15.83■□□□□ 0.12
PDCD1-202ENST00000343705 BBOX1O75936 387 aa15.82■□□□□ 0.12
PDCD1-202ENST00000343705 STK31Q9BXU1 1019 aa15.82■□□□□ 0.12
PDCD1-202ENST00000343705 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
PDCD1-202ENST00000343705 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
PDCD1-202ENST00000343705 VPS33BQ9H267 617 aa15.81■□□□□ 0.12
PDCD1-202ENST00000343705 LAMB2P55268 1798 aa15.8■□□□□ 0.12
PDCD1-202ENST00000343705 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
PDCD1-202ENST00000343705 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
PDCD1-202ENST00000343705 TWISTNBQ3B726 338 aaPredicted RBP15.8■□□□□ 0.12
PDCD1-202ENST00000343705 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
PDCD1-202ENST00000343705 SYNE4Q8N205 404 aa15.8■□□□□ 0.12
PDCD1-202ENST00000343705 APLP1P51693 650 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 CCDC191Q8NCU4 936 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 SMC1BQ8NDV3 1235 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 SUPT20HQ8NEM7 779 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 JDP2Q8WYK2 163 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
PDCD1-202ENST00000343705 SCN4AP35499 1836 aa15.78■□□□□ 0.12
PDCD1-202ENST00000343705 IQCA1LA6NCM1 817 aa15.78■□□□□ 0.12
PDCD1-202ENST00000343705 HCLS1P14317 486 aaPredicted RBP15.78■□□□□ 0.12
PDCD1-202ENST00000343705 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
PDCD1-202ENST00000343705 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
PDCD1-202ENST00000343705 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
PDCD1-202ENST00000343705 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
PDCD1-202ENST00000343705 SNED1Q8TER0 1413 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 ABCC4O15439 1325 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.12
PDCD1-202ENST00000343705 C3orf67Q6ZVT6 689 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 SP8Q8IXZ3 490 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
PDCD1-202ENST00000343705 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
PDCD1-202ENST00000343705 DDX60Q8IY21 1712 aaKnown RBP15.77■□□□□ 0.11
PDCD1-202ENST00000343705 FZD9O00144 591 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 NEXNQ0ZGT2 675 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 GRAPQ13588 217 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 OLFM4Q6UX06 510 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 KSR2Q6VAB6 950 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 GRAPLQ8TC17 118 aaPredicted RBP15.76■□□□□ 0.11
PDCD1-202ENST00000343705 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
PDCD1-202ENST00000343705 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
PDCD1-202ENST00000343705 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
PDCD1-202ENST00000343705 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
PDCD1-202ENST00000343705 MYD88Q99836 296 aa15.75■□□□□ 0.11
PDCD1-202ENST00000343705 CWC25Q9NXE8 425 aaPredicted RBP15.75■□□□□ 0.11
PDCD1-202ENST00000343705 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
PDCD1-202ENST00000343705 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
PDCD1-202ENST00000343705 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
PDCD1-202ENST00000343705 PCCAP05165 728 aaPredicted RBP15.74■□□□□ 0.11
PDCD1-202ENST00000343705 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
PDCD1-202ENST00000343705 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms