RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 CHMP4AQ9BY43 222 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 AIMP1Q12904 312 aaKnown RBP5.88□□□□□ -1.47
VAV3-201ENST00000343258 DUSP27Q5VZP5 1158 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 CCER2I3L3R5 266 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 GPTP24298 496 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 PRR5LQ6MZQ0 368 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
VAV3-201ENST00000343258 A0A087WZG4 1122 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 BRD2P25440 801 aaKnown RBP5.87□□□□□ -1.47
VAV3-201ENST00000343258 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 COPS6Q7L5N1 327 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 IPO4Q8TEX9 1081 aaKnown RBP5.87□□□□□ -1.47
VAV3-201ENST00000343258 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 IFT57Q9NWB7 429 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 BCS1LQ9Y276 419 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 UBN2Q6ZU65 1347 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 NUTM1Q86Y26 1132 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 SETDB2Q96T68 719 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 BABAM1Q9NWV8 329 aa5.87□□□□□ -1.47
VAV3-201ENST00000343258 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
VAV3-201ENST00000343258 N4BP2Q86UW6 1770 aaPredicted RBP5.86□□□□□ -1.47
VAV3-201ENST00000343258 KIAA1551Q9HCM1 1747 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 YY1P25490 414 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 GNAI1P63096 354 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 SYNE4Q8N205 404 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 PHAXQ9H814 394 aaKnown RBP5.86□□□□□ -1.47
VAV3-201ENST00000343258 PCNTO95613 3336 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 SCN7AQ01118 1682 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 MAP3K15Q6ZN16 1313 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 TGFB2P61812 414 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 CCDC27Q2M243 656 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 C3orf67Q6ZVT6 689 aa5.86□□□□□ -1.47
VAV3-201ENST00000343258 ABCC12Q96J65 1359 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 AFDNP55196 1824 aaKnown RBP5.85□□□□□ -1.47
VAV3-201ENST00000343258 SUSD4Q5VX71 490 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 CHADLQ6NUI6 762 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 NBPF5PQ86XG9 351 aaPredicted RBP5.85□□□□□ -1.47
VAV3-201ENST00000343258 CNBD1Q8NA66 436 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 DDX21Q9NR30 783 aaKnown RBP eCLIP5.85□□□□□ -1.47
VAV3-201ENST00000343258 LAMB4A4D0S4 1761 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 NFKBIBQ15653 356 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 CLEC4GQ6UXB4 293 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 G2E3Q7L622 706 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 C2CD5Q86YS7 1000 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 SPDYE1Q8NFV5 336 aaPredicted RBP5.85□□□□□ -1.47
VAV3-201ENST00000343258 CDCA7LQ96GN5 454 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 ZNF521Q96K83 1311 aa5.85□□□□□ -1.47
VAV3-201ENST00000343258 ERVV-1B6SEH8 477 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 ATP5J2-PTCD1G3V325 749 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 NPHP1O15259 732 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 PRELPP51888 382 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 ERFEQ4G0M1 354 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 GIGYF2Q6Y7W6 1299 aaKnown RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 KIF6Q6ZMV9 814 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 ZNF34Q8IZ26 560 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 ERBB4Q15303 1308 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 BCORQ6W2J9 1755 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 KIF13BQ9NQT8 1826 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 TWISTNBQ3B726 338 aaPredicted RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 JARID2Q92833 1246 aaPredicted RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 ZNF622Q969S3 477 aaKnown RBP eCLIP5.84□□□□□ -1.47
VAV3-201ENST00000343258 ZFP91Q96JP5 570 aaPredicted RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 BRIP1Q9BX63 1249 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 PIM2Q9P1W9 311 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 DBF4Q9UBU7 674 aaPredicted RBP5.84□□□□□ -1.47
VAV3-201ENST00000343258 ZNF652Q9Y2D9 606 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 NRXN2Q9P2S2 1712 aa5.84□□□□□ -1.47
VAV3-201ENST00000343258 NTSR2O95665 410 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 HOXB7P09629 217 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 PRR29P0C7W0 189 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 DALRD3Q5D0E6 543 aaKnown RBP5.83□□□□□ -1.48
VAV3-201ENST00000343258 ARHGAP27Q6ZUM4 889 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 ZNF784Q8NCA9 323 aaPredicted RBP5.83□□□□□ -1.48
VAV3-201ENST00000343258 ANKRD31Q8N7Z5 1873 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 ATP10DQ9P241 1426 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 H0YIN7 160 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 GRIN3BO60391 1043 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 SRGNP10124 158 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 HCLS1P14317 486 aaPredicted RBP5.83□□□□□ -1.48
VAV3-201ENST00000343258 HNRNPUQ00839 825 aaKnown RBP eCLIP5.83□□□□□ -1.48
VAV3-201ENST00000343258 RASSF7Q02833 373 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 TPTE2Q6XPS3 522 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 ANKRD13DQ6ZTN6 518 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 NLRP10Q86W26 655 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 WDR63Q8IWG1 891 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 IL16Q14005 1332 aa5.83□□□□□ -1.48
VAV3-201ENST00000343258 C21orf2O43822 256 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 VAMP4O75379 141 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 TCIRG1Q13488 830 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 ZNF526Q8TF50 670 aaPredicted RBP5.82□□□□□ -1.48
VAV3-201ENST00000343258 COL11A2P13942 1736 aaPredicted RBP5.82□□□□□ -1.48
VAV3-201ENST00000343258 TNRC6CQ9HCJ0 1690 aaKnown RBP5.82□□□□□ -1.48
VAV3-201ENST00000343258 NUP98P52948 1817 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 NFKBIEO00221 500 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 ST5P78524 1137 aa5.82□□□□□ -1.48
VAV3-201ENST00000343258 PRPF40BQ6NWY9 871 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms