RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TTLL7Q6ZT98 887 aa18.27■□□□□ 0.51
TPM3-208ENST00000341485 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.51
TPM3-208ENST00000341485 ARXQ96QS3 562 aa18.27■□□□□ 0.51
TPM3-208ENST00000341485 THSD7AQ9UPZ6 1657 aa18.26■□□□□ 0.51
TPM3-208ENST00000341485 CYP2E1P05181 493 aaPredicted RBP18.26■□□□□ 0.51
TPM3-208ENST00000341485 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
TPM3-208ENST00000341485 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
TPM3-208ENST00000341485 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
TPM3-208ENST00000341485 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
TPM3-208ENST00000341485 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
TPM3-208ENST00000341485 AFDNP55196 1824 aaKnown RBP18.25■□□□□ 0.51
TPM3-208ENST00000341485 NUCB2P80303 420 aa18.25■□□□□ 0.51
TPM3-208ENST00000341485 SKOR2Q2VWA4 1001 aaPredicted RBP18.25■□□□□ 0.51
TPM3-208ENST00000341485 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
TPM3-208ENST00000341485 ANO2Q9NQ90 1003 aa18.25■□□□□ 0.51
TPM3-208ENST00000341485 ATRNO75882 1429 aa18.25■□□□□ 0.51
TPM3-208ENST00000341485 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
TPM3-208ENST00000341485 MTX1Q13505 466 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 GCKRQ14397 625 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
TPM3-208ENST00000341485 IL25Q9H293 177 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 ZBTB3Q9H5J0 574 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 TJP1Q07157 1748 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 KCNQ2O43526 872 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 MCCP23508 829 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 NEK4P51957 841 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
TPM3-208ENST00000341485 UTYO14607 1347 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 MAP4K4O95819 1239 aaPredicted RBP18.23■□□□□ 0.51
TPM3-208ENST00000341485 PKP1Q13835 747 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
TPM3-208ENST00000341485 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
TPM3-208ENST00000341485 ANAPC15P60006 121 aa18.22■□□□□ 0.51
TPM3-208ENST00000341485 SUCLG2Q96I99 432 aa18.22■□□□□ 0.51
TPM3-208ENST00000341485 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 SIK1P57059 783 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
TPM3-208ENST00000341485 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
TPM3-208ENST00000341485 GOLGA6L22H0YM25 854 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 TMX3Q96JJ7 454 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 PANK2Q9BZ23 570 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
TPM3-208ENST00000341485 A0A087WZG4 1122 aa18.19■□□□□ 0.5
TPM3-208ENST00000341485 MCM2P49736 904 aa18.19■□□□□ 0.5
TPM3-208ENST00000341485 MRE11P49959 708 aa18.19■□□□□ 0.5
TPM3-208ENST00000341485 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
TPM3-208ENST00000341485 ZDHHC9Q9Y397 364 aa18.19■□□□□ 0.5
TPM3-208ENST00000341485 EPB41L2O43491 1005 aaKnown RBP18.19■□□□□ 0.5
TPM3-208ENST00000341485 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
TPM3-208ENST00000341485 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
TPM3-208ENST00000341485 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
TPM3-208ENST00000341485 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 CNTROBQ8N137 903 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 ISY1Q9ULR0 285 aaKnown RBP18.18■□□□□ 0.5
TPM3-208ENST00000341485 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
TPM3-208ENST00000341485 SGSM2O43147 1006 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
TPM3-208ENST00000341485 HSPA4P34932 840 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
TPM3-208ENST00000341485 CUL4AQ13619 759 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 GAS2L3Q86XJ1 694 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 GRPEL1Q9HAV7 217 aa18.18■□□□□ 0.5
TPM3-208ENST00000341485 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
TPM3-208ENST00000341485 JARID2Q92833 1246 aaPredicted RBP18.17■□□□□ 0.5
TPM3-208ENST00000341485 KAZALD1Q96I82 304 aa18.17■□□□□ 0.5
TPM3-208ENST00000341485 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
TPM3-208ENST00000341485 TCIRG1Q13488 830 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 NHSQ6T4R5 1651 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 RAD50Q92878 1312 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 GLRX3O76003 335 aaKnown RBP18.16■□□□□ 0.5
TPM3-208ENST00000341485 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
TPM3-208ENST00000341485 ITPK1Q13572 414 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
TPM3-208ENST00000341485 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
TPM3-208ENST00000341485 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
TPM3-208ENST00000341485 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
TPM3-208ENST00000341485 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
TPM3-208ENST00000341485 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
TPM3-208ENST00000341485 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
TPM3-208ENST00000341485 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.5
TPM3-208ENST00000341485 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.5
TPM3-208ENST00000341485 HSP90AB3PQ58FF7 597 aa18.14■□□□□ 0.49
TPM3-208ENST00000341485 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
TPM3-208ENST00000341485 GIGYF2Q6Y7W6 1299 aaKnown RBP18.14■□□□□ 0.49
TPM3-208ENST00000341485 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
TPM3-208ENST00000341485 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
TPM3-208ENST00000341485 BTAF1O14981 1849 aa18.14■□□□□ 0.49
TPM3-208ENST00000341485 H7C1W4 665 aa18.13■□□□□ 0.49
TPM3-208ENST00000341485 COL15A1P39059 1388 aa18.13■□□□□ 0.49
TPM3-208ENST00000341485 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
TPM3-208ENST00000341485 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 329.3 ms