RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 CAVIN2O95810 425 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 LTKP29376 864 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 AK2P54819 239 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
TRAK1-202ENST00000341421 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
TRAK1-202ENST00000341421 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 PPLO60437 1756 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 CTAGE5O15320 804 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 RNMTO43148 476 aaKnown RBP13.76□□□□□ -0.21
TRAK1-202ENST00000341421 GPS2Q13227 327 aa13.76□□□□□ -0.21
TRAK1-202ENST00000341421 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
TRAK1-202ENST00000341421 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 TSPYL1Q9H0U9 437 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 OGFRQ9NZT2 677 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 STAP2Q9UGK3 403 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 IMMTQ16891 758 aaKnown RBP13.75□□□□□ -0.21
TRAK1-202ENST00000341421 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAK1-202ENST00000341421 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 IGSF3O75054 1194 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 CDKL5O76039 1030 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 NEK1Q96PY6 1258 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 GCP02774 474 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 HSPA4P34932 840 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
TRAK1-202ENST00000341421 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 MYOM1P52179 1685 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 TPM1P09493 284 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
TRAK1-202ENST00000341421 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAK1-202ENST00000341421 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
TRAK1-202ENST00000341421 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
TRAK1-202ENST00000341421 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 TMEM63CQ9P1W3 806 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 REREQ9P2R6 1566 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 BRD1O95696 1058 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 DDX54Q8TDD1 881 aaKnown RBP13.74□□□□□ -0.21
TRAK1-202ENST00000341421 TSC1Q92574 1164 aa13.74□□□□□ -0.21
TRAK1-202ENST00000341421 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 EIF4A1P60842 406 aaKnown RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 DDX11Q96FC9 970 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 CCP110O43303 1012 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 XBP1P17861 261 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 HOMER1Q86YM7 354 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 LRRC59Q96AG4 307 aaKnown RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
TRAK1-202ENST00000341421 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 CCDC171Q6TFL3 1326 aa13.73□□□□□ -0.21
TRAK1-202ENST00000341421 RUFY3Q7L099 469 aa13.72□□□□□ -0.21
TRAK1-202ENST00000341421 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
TRAK1-202ENST00000341421 SYT1P21579 422 aa13.72□□□□□ -0.21
TRAK1-202ENST00000341421 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
TRAK1-202ENST00000341421 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
TRAK1-202ENST00000341421 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
TRAK1-202ENST00000341421 PA2G4Q9UQ80 394 aaKnown RBP13.72□□□□□ -0.21
TRAK1-202ENST00000341421 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
TRAK1-202ENST00000341421 CLSTN1O94985 981 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.213e-10■■■■■ 44.2
TRAK1-202ENST00000341421 NMIQ13287 307 aaPredicted RBP13.71□□□□□ -0.21
TRAK1-202ENST00000341421 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 CWC25Q9NXE8 425 aaPredicted RBP13.71□□□□□ -0.21
TRAK1-202ENST00000341421 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
TRAK1-202ENST00000341421 CAMK4Q16566 473 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 CLEC17AQ6ZS10 378 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 ANO10Q9NW15 660 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.21
TRAK1-202ENST00000341421 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
TRAK1-202ENST00000341421 TNNT1P13805 278 aa13.71□□□□□ -0.22
TRAK1-202ENST00000341421 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.22
TRAK1-202ENST00000341421 ANKRD20A12PQ8NF67 263 aa13.71□□□□□ -0.22
TRAK1-202ENST00000341421 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-202ENST00000341421 STARD3NLO95772 234 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-202ENST00000341421 NACAP1Q9BZK3 213 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 SMC2O95347 1197 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 NECAB1Q8N987 351 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 GPT2Q8TD30 523 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
TRAK1-202ENST00000341421 RGS12O14924 1447 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
TRAK1-202ENST00000341421 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms