RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KIF7Q2M1P5 1343 aa22.05■■□□□ 1.12
NECTIN1-202ENST00000340882 SNRPA1P09661 255 aaKnown RBP22.03■■□□□ 1.12
NECTIN1-202ENST00000340882 EIF6P56537 245 aaKnown RBP22.03■■□□□ 1.12
NECTIN1-202ENST00000340882 CNGB1Q14028 1251 aaPredicted RBP22.03■■□□□ 1.12
NECTIN1-202ENST00000340882 NUTM1Q86Y26 1132 aa22.03■■□□□ 1.12
NECTIN1-202ENST00000340882 TLL2Q9Y6L7 1015 aa22.03■■□□□ 1.12
NECTIN1-202ENST00000340882 ECE1P42892 770 aa22.02■■□□□ 1.12
NECTIN1-202ENST00000340882 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.12
NECTIN1-202ENST00000340882 CRY2Q49AN0 593 aa22.02■■□□□ 1.12
NECTIN1-202ENST00000340882 BEGAINQ9BUH8 593 aa22.02■■□□□ 1.12
NECTIN1-202ENST00000340882 LMOD1P29536 600 aaPredicted RBP22.01■■□□□ 1.11
NECTIN1-202ENST00000340882 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
NECTIN1-202ENST00000340882 MCM10Q7L590 875 aa22.01■■□□□ 1.11
NECTIN1-202ENST00000340882 MCOLN1Q9GZU1 580 aa22■■□□□ 1.11
NECTIN1-202ENST00000340882 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
NECTIN1-202ENST00000340882 LAMB4A4D0S4 1761 aa21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 RGL2O15211 777 aa21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 GTF2E1P29083 439 aaPredicted RBP21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 USP50Q70EL3 339 aaPredicted RBP21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 LARGE2Q8N3Y3 721 aa21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
NECTIN1-202ENST00000340882 DCTN1Q14203 1278 aa21.98■■□□□ 1.11
NECTIN1-202ENST00000340882 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
NECTIN1-202ENST00000340882 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
NECTIN1-202ENST00000340882 MAP2K2P36507 400 aa21.97■■□□□ 1.11
NECTIN1-202ENST00000340882 CFAP44Q96MT7 982 aa21.97■■□□□ 1.11
NECTIN1-202ENST00000340882 HOXA10P31260 410 aaPredicted RBP21.96■■□□□ 1.11
NECTIN1-202ENST00000340882 CC2D2BQ6DHV5 1058 aa21.96■■□□□ 1.11
NECTIN1-202ENST00000340882 SAPCD2Q86UD0 394 aa21.96■■□□□ 1.11
NECTIN1-202ENST00000340882 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
NECTIN1-202ENST00000340882 NGEFQ8N5V2 710 aa21.95■■□□□ 1.1
NECTIN1-202ENST00000340882 CELF2O95319 508 aaKnown RBP21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 GLIS2Q9BZE0 524 aaPredicted RBP21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 GPRC5DQ9NZD1 345 aa21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 PCDH10Q9P2E7 1040 aa21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 UBN2Q6ZU65 1347 aa21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 RIC1Q4ADV7 1423 aa21.94■■□□□ 1.1
NECTIN1-202ENST00000340882 PDE4DIPQ5VU43 2346 aa21.93■■□□□ 1.1
NECTIN1-202ENST00000340882 TTLL7Q6ZT98 887 aa21.93■■□□□ 1.1
NECTIN1-202ENST00000340882 RPGRQ92834 1020 aaKnown RBP21.93■■□□□ 1.1
NECTIN1-202ENST00000340882 ZIC5Q96T25 663 aa21.93■■□□□ 1.1
NECTIN1-202ENST00000340882 GPTP24298 496 aa21.92■■□□□ 1.1
NECTIN1-202ENST00000340882 AOC3Q16853 763 aa21.92■■□□□ 1.1
NECTIN1-202ENST00000340882 NIM1KQ8IY84 436 aa21.92■■□□□ 1.1
NECTIN1-202ENST00000340882 NYXQ9GZU5 481 aa21.92■■□□□ 1.1
NECTIN1-202ENST00000340882 ADARB2Q9NS39 739 aaKnown RBP21.92■■□□□ 1.1
NECTIN1-202ENST00000340882 PPEF1O14829 653 aaPredicted RBP21.91■■□□□ 1.1
NECTIN1-202ENST00000340882 PPIP5K2O43314 1243 aa21.91■■□□□ 1.1
NECTIN1-202ENST00000340882 CXCL9Q07325 125 aa21.91■■□□□ 1.1
NECTIN1-202ENST00000340882 DGKZQ13574 1117 aa21.91■■□□□ 1.1
NECTIN1-202ENST00000340882 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
NECTIN1-202ENST00000340882 DLG5Q8TDM6 1919 aa21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 NPC1L1Q9UHC9 1359 aa21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 KDM3BQ7LBC6 1761 aa21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 HIRAP54198 1017 aaPredicted RBP21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 CIAPIN1Q6FI81 312 aa21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 CRAMP1Q96RY5 1269 aa21.9■■□□□ 1.1
NECTIN1-202ENST00000340882 MAP3K15Q6ZN16 1313 aa21.89■■□□□ 1.1
NECTIN1-202ENST00000340882 POLR2AP24928 1970 aaKnown RBP21.89■■□□□ 1.09
NECTIN1-202ENST00000340882 ERVV-1B6SEH8 477 aa21.89■■□□□ 1.09
NECTIN1-202ENST00000340882 BRPF1P55201 1214 aaPredicted RBP21.89■■□□□ 1.09
NECTIN1-202ENST00000340882 LAMB2P55268 1798 aa21.89■■□□□ 1.09
NECTIN1-202ENST00000340882 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 DLK2Q6UY11 383 aa21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 ZNF408Q9H9D4 720 aa21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 PGAP2Q9UHJ9 254 aa21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 TAF1P21675 1872 aa21.88■■□□□ 1.09
NECTIN1-202ENST00000340882 SHTN1A0MZ66 631 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 CA12O43570 354 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 NTSR2O95665 410 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 GRIPAP1Q4V328 841 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 HHIPL1Q96JK4 782 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 ZBTB3Q9H5J0 574 aa21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
NECTIN1-202ENST00000340882 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
NECTIN1-202ENST00000340882 ZNF34Q8IZ26 560 aa21.86■■□□□ 1.09
NECTIN1-202ENST00000340882 TRPM4Q8TD43 1214 aa21.86■■□□□ 1.09
NECTIN1-202ENST00000340882 ZNRF3Q9ULT6 936 aa21.86■■□□□ 1.09
NECTIN1-202ENST00000340882 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
NECTIN1-202ENST00000340882 MYL6BP14649 208 aa21.84■■□□□ 1.09
NECTIN1-202ENST00000340882 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
NECTIN1-202ENST00000340882 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
NECTIN1-202ENST00000340882 RAD17O75943 681 aa21.83■■□□□ 1.09
NECTIN1-202ENST00000340882 KIF6Q6ZMV9 814 aa21.83■■□□□ 1.09
NECTIN1-202ENST00000340882 RTFDC1Q9BY42 306 aaPredicted RBP21.83■■□□□ 1.09
NECTIN1-202ENST00000340882 ABCC4O15439 1325 aa21.82■■□□□ 1.08
NECTIN1-202ENST00000340882 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
NECTIN1-202ENST00000340882 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
NECTIN1-202ENST00000340882 VPS33BQ9H267 617 aa21.81■■□□□ 1.08
NECTIN1-202ENST00000340882 SOX10P56693 466 aa21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 CDC37L1Q7L3B6 337 aa21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 USP48Q86UV5 1035 aa21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
NECTIN1-202ENST00000340882 AKAP11Q9UKA4 1901 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms