RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 C21orf2O43822 256 aa28.92■■■□□ 2.22
PBX1-201ENST00000340699 ALDH1B1P30837 517 aa28.92■■■□□ 2.22
PBX1-201ENST00000340699 PRPF40BQ6NWY9 871 aaKnown RBP28.92■■■□□ 2.22
PBX1-201ENST00000340699 SPINK5Q9NQ38 1064 aaPredicted RBP28.92■■■□□ 2.22
PBX1-201ENST00000340699 TRMT112Q9UI30 125 aaKnown RBP28.92■■■□□ 2.22
PBX1-201ENST00000340699 TCERG1O14776 1098 aaKnown RBP28.91■■■□□ 2.22
PBX1-201ENST00000340699 RPGRQ92834 1020 aaKnown RBP28.91■■■□□ 2.22
PBX1-201ENST00000340699 NLRP3Q96P20 1036 aa28.91■■■□□ 2.22
PBX1-201ENST00000340699 RIC1Q4ADV7 1423 aa28.91■■■□□ 2.22
PBX1-201ENST00000340699 ISCA1Q9BUE6 129 aa28.9■■■□□ 2.22
PBX1-201ENST00000340699 ATP5J2-PTCD1G3V325 749 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 SLC4A2P04920 1241 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 CRY2Q49AN0 593 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 SLC10A5Q5PT55 438 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 SOGA3Q5TF21 947 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 C9orf131Q5VYM1 1079 aa28.89■■■□□ 2.22
PBX1-201ENST00000340699 ZNF521Q96K83 1311 aa28.89■■■□□ 2.21
PBX1-201ENST00000340699 CACNA1SQ13698 1873 aa28.89■■■□□ 2.21
PBX1-201ENST00000340699 ADCY9O60503 1353 aa28.88■■■□□ 2.21
PBX1-201ENST00000340699 VAMP4O75379 141 aa28.88■■■□□ 2.21
PBX1-201ENST00000340699 TNRC6CQ9HCJ0 1690 aaKnown RBP28.88■■■□□ 2.21
PBX1-201ENST00000340699 SH3TC1Q8TE82 1336 aa28.88■■■□□ 2.21
PBX1-201ENST00000340699 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
PBX1-201ENST00000340699 SLX4Q8IY92 1834 aa28.87■■■□□ 2.21
PBX1-201ENST00000340699 RNF181Q9P0P0 153 aa28.87■■■□□ 2.21
PBX1-201ENST00000340699 RASSF7Q02833 373 aa28.86■■■□□ 2.21
PBX1-201ENST00000340699 TRIM28Q13263 835 aaKnown RBP28.86■■■□□ 2.21
PBX1-201ENST00000340699 MIER1Q8N108 512 aa28.86■■■□□ 2.21
PBX1-201ENST00000340699 RBM17Q96I25 401 aaKnown RBP28.86■■■□□ 2.21
PBX1-201ENST00000340699 MYD88Q99836 296 aa28.86■■■□□ 2.21
PBX1-201ENST00000340699 LMNB1P20700 586 aa28.84■■■□□ 2.21
PBX1-201ENST00000340699 KSR2Q6VAB6 950 aa28.84■■■□□ 2.21
PBX1-201ENST00000340699 ZNF428Q96B54 188 aa28.84■■■□□ 2.21
PBX1-201ENST00000340699 HCLS1P14317 486 aaPredicted RBP28.83■■■□□ 2.21
PBX1-201ENST00000340699 HOXA10P31260 410 aaPredicted RBP28.83■■■□□ 2.21
PBX1-201ENST00000340699 ZNF526Q8TF50 670 aaPredicted RBP28.83■■■□□ 2.21
PBX1-201ENST00000340699 METTL22Q9BUU2 404 aaPredicted RBP28.83■■■□□ 2.21
PBX1-201ENST00000340699 GPBP1L1Q9HC44 474 aaPredicted RBP28.83■■■□□ 2.21
PBX1-201ENST00000340699 MAP3K2Q9Y2U5 619 aa28.83■■■□□ 2.21
PBX1-201ENST00000340699 E9PSI1 815 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 NFKBIEO00221 500 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 CCDC93Q567U6 631 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 SYNE4Q8N205 404 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 CRAMP1Q96RY5 1269 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 SBF1O95248 1867 aa28.82■■■□□ 2.2
PBX1-201ENST00000340699 PI4KAP2A4QPH2 592 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 C3orf67Q6ZVT6 689 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 G2E3Q7L622 706 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 PI4KAP1Q8N8J0 262 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 C7orf43Q8WVR3 580 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 FAM89AQ96GI7 184 aa28.81■■■□□ 2.2
PBX1-201ENST00000340699 NEXNQ0ZGT2 675 aa28.8■■■□□ 2.2
PBX1-201ENST00000340699 CCDC191Q8NCU4 936 aa28.8■■■□□ 2.2
PBX1-201ENST00000340699 TAOK3Q9H2K8 898 aa28.8■■■□□ 2.2
PBX1-201ENST00000340699 CACNA1FO60840 1977 aa28.79■■■□□ 2.2
PBX1-201ENST00000340699 FLIIQ13045 1269 aa28.79■■■□□ 2.2
PBX1-201ENST00000340699 FER1L6Q2WGJ9 1857 aa28.78■■■□□ 2.2
PBX1-201ENST00000340699 RTL5Q5HYW3 569 aaPredicted RBP28.78■■■□□ 2.2
PBX1-201ENST00000340699 RTKN2Q8IZC4 609 aa28.78■■■□□ 2.2
PBX1-201ENST00000340699 CWC25Q9NXE8 425 aaPredicted RBP28.78■■■□□ 2.2
PBX1-201ENST00000340699 LTBP3Q9NS15 1303 aa28.77■■■□□ 2.2
PBX1-201ENST00000340699 HSP90B1P14625 803 aaKnown RBP28.77■■■□□ 2.2
PBX1-201ENST00000340699 FKBP5Q13451 457 aaPredicted RBP28.77■■■□□ 2.2
PBX1-201ENST00000340699 ZBTB38Q8NAP3 1195 aaPredicted RBP28.77■■■□□ 2.2
PBX1-201ENST00000340699 SLFN5Q08AF3 891 aa28.76■■■□□ 2.19
PBX1-201ENST00000340699 CC2D2BQ6DHV5 1058 aa28.76■■■□□ 2.19
PBX1-201ENST00000340699 DDX46Q7L014 1031 aaKnown RBP28.76■■■□□ 2.19
PBX1-201ENST00000340699 TMX4Q9H1E5 349 aaPredicted RBP28.76■■■□□ 2.19
PBX1-201ENST00000340699 ZC3H4Q9UPT8 1303 aaKnown RBP28.75■■■□□ 2.19
PBX1-201ENST00000340699 CCDC88AQ3V6T2 1871 aa28.75■■■□□ 2.19
PBX1-201ENST00000340699 IRS4O14654 1257 aaPredicted RBP28.75■■■□□ 2.19
PBX1-201ENST00000340699 PPEF1O14829 653 aaPredicted RBP28.75■■■□□ 2.19
PBX1-201ENST00000340699 PRELPP51888 382 aa28.75■■■□□ 2.19
PBX1-201ENST00000340699 OLFM4Q6UX06 510 aa28.74■■■□□ 2.19
PBX1-201ENST00000340699 LAMB2P55268 1798 aa28.73■■■□□ 2.19
PBX1-201ENST00000340699 PCCAP05165 728 aaPredicted RBP28.73■■■□□ 2.19
PBX1-201ENST00000340699 FKBP4Q02790 459 aaKnown RBP eCLIP28.73■■■□□ 2.19
PBX1-201ENST00000340699 GRIPAP1Q4V328 841 aa28.73■■■□□ 2.19
PBX1-201ENST00000340699 ABCC4O15439 1325 aa28.72■■■□□ 2.19
PBX1-201ENST00000340699 DDX60Q8IY21 1712 aaKnown RBP28.72■■■□□ 2.19
PBX1-201ENST00000340699 BBOX1O75936 387 aa28.71■■■□□ 2.19
PBX1-201ENST00000340699 IGKV5-2P06315 115 aa28.71■■■□□ 2.19
PBX1-201ENST00000340699 SF3B3Q15393 1217 aaKnown RBP28.71■■■□□ 2.19
PBX1-201ENST00000340699 DNAAF4Q8WXU2 420 aa28.71■■■□□ 2.19
PBX1-201ENST00000340699 CDCA7LQ96GN5 454 aa28.71■■■□□ 2.19
PBX1-201ENST00000340699 KDM2BQ8NHM5 1336 aa28.7■■■□□ 2.19
PBX1-201ENST00000340699 GRAPQ13588 217 aa28.69■■■□□ 2.18
PBX1-201ENST00000340699 GRAPLQ8TC17 118 aaPredicted RBP28.69■■■□□ 2.18
PBX1-201ENST00000340699 NEURL1BA8MQ27 555 aa28.68■■■□□ 2.18
PBX1-201ENST00000340699 CWF19L2Q2TBE0 894 aaKnown RBP28.68■■■□□ 2.18
PBX1-201ENST00000340699 JARID2Q92833 1246 aaPredicted RBP28.68■■■□□ 2.18
PBX1-201ENST00000340699 ATP6V0A2Q9Y487 856 aa28.68■■■□□ 2.18
PBX1-201ENST00000340699 PDE8AO60658 829 aa28.67■■■□□ 2.18
PBX1-201ENST00000340699 PSMD1Q99460 953 aa28.67■■■□□ 2.18
PBX1-201ENST00000340699 DICER1Q9UPY3 1922 aaKnown RBP28.67■■■□□ 2.18
PBX1-201ENST00000340699 DPY19L2Q6NUT2 758 aa28.66■■■□□ 2.18
PBX1-201ENST00000340699 ZNF277Q9NRM2 450 aaPredicted RBP28.66■■■□□ 2.18
PBX1-201ENST00000340699 CDHR2Q9BYE9 1310 aa28.66■■■□□ 2.18
PBX1-201ENST00000340699 TIAM2Q8IVF5 1701 aa28.66■■■□□ 2.18
PBX1-201ENST00000340699 TMC4Q7Z404 712 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 1267 ms