RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
UPK3BL1-201ENST00000340457 ERVV-1B6SEH8 477 aa18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 SUSD4Q5VX71 490 aa18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 KIF6Q6ZMV9 814 aa18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 PNMA8AQ86V59 439 aaPredicted RBP18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 PSMD1Q99460 953 aa18.27■□□□□ 0.52
UPK3BL1-201ENST00000340457 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
UPK3BL1-201ENST00000340457 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
UPK3BL1-201ENST00000340457 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
UPK3BL1-201ENST00000340457 NEFMP07197 916 aa18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 CTCFP49711 727 aaPredicted RBP18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 LARGE2Q8N3Y3 721 aa18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
UPK3BL1-201ENST00000340457 HOXA10P31260 410 aaPredicted RBP18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 EPS15P42566 896 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 LBX1P52954 281 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 WBP1LQ9NX94 342 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 LTBP1Q14766 1721 aa18.24■□□□□ 0.51
UPK3BL1-201ENST00000340457 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 NTSR2O95665 410 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 LMOD1P29536 600 aaPredicted RBP18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 SCNN1DP51172 638 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 CC2D2BQ6DHV5 1058 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
UPK3BL1-201ENST00000340457 ANXA1P04083 346 aa18.22■□□□□ 0.51
UPK3BL1-201ENST00000340457 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
UPK3BL1-201ENST00000340457 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 TRAF5O00463 557 aa18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 GRM1Q13255 1194 aa18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 GIGYF2Q6Y7W6 1299 aaKnown RBP18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.51
UPK3BL1-201ENST00000340457 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
UPK3BL1-201ENST00000340457 HSPA8P11142 646 aaKnown RBP18.2■□□□□ 0.5
UPK3BL1-201ENST00000340457 AOC3Q16853 763 aa18.2■□□□□ 0.5
UPK3BL1-201ENST00000340457 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
UPK3BL1-201ENST00000340457 NIM1KQ8IY84 436 aa18.2■□□□□ 0.5
UPK3BL1-201ENST00000340457 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 RIC1Q4ADV7 1423 aa18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 NECTIN2Q92692 538 aa18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 TSPYL4Q9UJ04 414 aa18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
UPK3BL1-201ENST00000340457 PDIA6Q15084 440 aa18.18■□□□□ 0.5
UPK3BL1-201ENST00000340457 ZNF428Q96B54 188 aa18.18■□□□□ 0.5
UPK3BL1-201ENST00000340457 NLRP3Q96P20 1036 aa18.18■□□□□ 0.5
UPK3BL1-201ENST00000340457 CST9Q5W186 159 aa18.17■□□□□ 0.5
UPK3BL1-201ENST00000340457 CYP4F22Q6NT55 531 aa18.17■□□□□ 0.5
UPK3BL1-201ENST00000340457 LRP10Q7Z4F1 713 aa18.17■□□□□ 0.5
UPK3BL1-201ENST00000340457 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
UPK3BL1-201ENST00000340457 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
UPK3BL1-201ENST00000340457 ABCC4O15439 1325 aa18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 GRIPAP1Q4V328 841 aa18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
UPK3BL1-201ENST00000340457 ERBB4Q15303 1308 aa18.15■□□□□ 0.5
UPK3BL1-201ENST00000340457 CXCL9Q07325 125 aa18.15■□□□□ 0.5
UPK3BL1-201ENST00000340457 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
UPK3BL1-201ENST00000340457 USP50Q70EL3 339 aaPredicted RBP18.15■□□□□ 0.5
UPK3BL1-201ENST00000340457 TMX4Q9H1E5 349 aaPredicted RBP18.15■□□□□ 0.5
UPK3BL1-201ENST00000340457 GMPSP49915 693 aaPredicted RBP18.14■□□□□ 0.49
UPK3BL1-201ENST00000340457 RIPK4P57078 832 aa18.14■□□□□ 0.49
UPK3BL1-201ENST00000340457 GPRC5DQ9NZD1 345 aa18.14■□□□□ 0.49
UPK3BL1-201ENST00000340457 TRPM7Q96QT4 1865 aa18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 GPR101Q96P66 508 aaPredicted RBP18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 ADARB2Q9NS39 739 aaKnown RBP18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 TSKSQ9UJT2 592 aa18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 ZNRF3Q9ULT6 936 aa18.13■□□□□ 0.49
UPK3BL1-201ENST00000340457 AOC2O75106 756 aa18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 RAD17O75943 681 aa18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 ABHD8Q96I13 439 aa18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 TAF1P21675 1872 aa18.12■□□□□ 0.49
UPK3BL1-201ENST00000340457 ECE1P42892 770 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 NLRP10Q86W26 655 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 MPNDQ8N594 471 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 TLL2Q9Y6L7 1015 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 LAMB2P55268 1798 aa18.11■□□□□ 0.49
UPK3BL1-201ENST00000340457 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms