RNA–Protein interactions for RNA: ENST00000339413.10

YIF1B-203, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIF1B, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-203ENST00000339413 ARFGEF2Q9Y6D5 1785 aa21.98■■□□□ 1.11
YIF1B-203ENST00000339413 TRIM28Q13263 835 aaKnown RBP21.98■■□□□ 1.11
YIF1B-203ENST00000339413 RIC3Q7Z5B4 369 aa21.98■■□□□ 1.11
YIF1B-203ENST00000339413 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
YIF1B-203ENST00000339413 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
YIF1B-203ENST00000339413 ABCC12Q96J65 1359 aa21.98■■□□□ 1.11
YIF1B-203ENST00000339413 YY1P25490 414 aa21.97■■□□□ 1.11
YIF1B-203ENST00000339413 SLC10A5Q5PT55 438 aa21.97■■□□□ 1.11
YIF1B-203ENST00000339413 STYK1Q6J9G0 422 aa21.97■■□□□ 1.11
YIF1B-203ENST00000339413 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
YIF1B-203ENST00000339413 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
YIF1B-203ENST00000339413 MASTLQ96GX5 879 aa21.96■■□□□ 1.11
YIF1B-203ENST00000339413 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
YIF1B-203ENST00000339413 DDX58O95786 925 aaKnown RBP21.95■■□□□ 1.1
YIF1B-203ENST00000339413 KSR2Q6VAB6 950 aa21.95■■□□□ 1.1
YIF1B-203ENST00000339413 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.1
YIF1B-203ENST00000339413 TNRC6CQ9HCJ0 1690 aaKnown RBP21.95■■□□□ 1.1
YIF1B-203ENST00000339413 NPR1P16066 1061 aa21.94■■□□□ 1.1
YIF1B-203ENST00000339413 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
YIF1B-203ENST00000339413 ARHGAP27Q6ZUM4 889 aa21.94■■□□□ 1.1
YIF1B-203ENST00000339413 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
YIF1B-203ENST00000339413 METTL22Q9BUU2 404 aaPredicted RBP21.94■■□□□ 1.1
YIF1B-203ENST00000339413 PI4KAP2A4QPH2 592 aa21.93■■□□□ 1.1
YIF1B-203ENST00000339413 ADCY9O60503 1353 aa21.93■■□□□ 1.1
YIF1B-203ENST00000339413 PI4KAP1Q8N8J0 262 aa21.93■■□□□ 1.1
YIF1B-203ENST00000339413 CNKSR1Q969H4 720 aa21.93■■□□□ 1.1
YIF1B-203ENST00000339413 TRMT112Q9UI30 125 aaKnown RBP21.93■■□□□ 1.1
YIF1B-203ENST00000339413 MAP3K2Q9Y2U5 619 aa21.93■■□□□ 1.1
YIF1B-203ENST00000339413 SLX4Q8IY92 1834 aa21.92■■□□□ 1.1
YIF1B-203ENST00000339413 FLIIQ13045 1269 aa21.92■■□□□ 1.1
YIF1B-203ENST00000339413 C3orf67Q6ZVT6 689 aa21.92■■□□□ 1.1
YIF1B-203ENST00000339413 MYD88Q99836 296 aa21.92■■□□□ 1.1
YIF1B-203ENST00000339413 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
YIF1B-203ENST00000339413 ZNF428Q96B54 188 aa21.91■■□□□ 1.1
YIF1B-203ENST00000339413 NLRP3Q96P20 1036 aa21.9■■□□□ 1.1
YIF1B-203ENST00000339413 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
YIF1B-203ENST00000339413 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.09
YIF1B-203ENST00000339413 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
YIF1B-203ENST00000339413 CCDC191Q8NCU4 936 aa21.89■■□□□ 1.09
YIF1B-203ENST00000339413 C7orf43Q8WVR3 580 aa21.89■■□□□ 1.09
YIF1B-203ENST00000339413 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
YIF1B-203ENST00000339413 C21orf2O43822 256 aa21.88■■□□□ 1.09
YIF1B-203ENST00000339413 IGKV5-2P06315 115 aa21.88■■□□□ 1.09
YIF1B-203ENST00000339413 ALDH1B1P30837 517 aa21.88■■□□□ 1.09
YIF1B-203ENST00000339413 FAM89AQ96GI7 184 aa21.88■■□□□ 1.09
YIF1B-203ENST00000339413 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
YIF1B-203ENST00000339413 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
YIF1B-203ENST00000339413 LAMB2P55268 1798 aa21.87■■□□□ 1.09
YIF1B-203ENST00000339413 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
YIF1B-203ENST00000339413 CRAMP1Q96RY5 1269 aa21.86■■□□□ 1.09
YIF1B-203ENST00000339413 CWC25Q9NXE8 425 aaPredicted RBP21.86■■□□□ 1.09
YIF1B-203ENST00000339413 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
YIF1B-203ENST00000339413 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
YIF1B-203ENST00000339413 SBF1O95248 1867 aa21.86■■□□□ 1.09
YIF1B-203ENST00000339413 MRPL50Q8N5N7 158 aaKnown RBP21.85■■□□□ 1.09
YIF1B-203ENST00000339413 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
YIF1B-203ENST00000339413 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
YIF1B-203ENST00000339413 FER1L6Q2WGJ9 1857 aa21.84■■□□□ 1.09
YIF1B-203ENST00000339413 NFKBIEO00221 500 aa21.84■■□□□ 1.09
YIF1B-203ENST00000339413 PCCAP05165 728 aaPredicted RBP21.84■■□□□ 1.09
YIF1B-203ENST00000339413 NEXNQ0ZGT2 675 aa21.84■■□□□ 1.09
YIF1B-203ENST00000339413 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
YIF1B-203ENST00000339413 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
YIF1B-203ENST00000339413 NEURL1BA8MQ27 555 aa21.83■■□□□ 1.09
YIF1B-203ENST00000339413 IRS4O14654 1257 aaPredicted RBP21.83■■□□□ 1.09
YIF1B-203ENST00000339413 PRELPP51888 382 aa21.83■■□□□ 1.09
YIF1B-203ENST00000339413 CWF19L2Q2TBE0 894 aaKnown RBP21.83■■□□□ 1.09
YIF1B-203ENST00000339413 SSH1Q8WYL5 1049 aa21.83■■□□□ 1.09
YIF1B-203ENST00000339413 F6X3S4 739 aa21.82■■□□□ 1.08
YIF1B-203ENST00000339413 CT47B1P0C2W7 299 aaPredicted RBP21.82■■□□□ 1.08
YIF1B-203ENST00000339413 RASSF7Q02833 373 aa21.82■■□□□ 1.08
YIF1B-203ENST00000339413 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
YIF1B-203ENST00000339413 ZNF784Q8NCA9 323 aaPredicted RBP21.82■■□□□ 1.08
YIF1B-203ENST00000339413 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
YIF1B-203ENST00000339413 ALDH1L2Q3SY69 923 aa21.81■■□□□ 1.08
YIF1B-203ENST00000339413 SOGA3Q5TF21 947 aa21.81■■□□□ 1.08
YIF1B-203ENST00000339413 C9orf131Q5VYM1 1079 aa21.81■■□□□ 1.08
YIF1B-203ENST00000339413 OLFM4Q6UX06 510 aa21.8■■□□□ 1.08
YIF1B-203ENST00000339413 LINS1Q8NG48 757 aa21.8■■□□□ 1.08
YIF1B-203ENST00000339413 CDHR2Q9BYE9 1310 aa21.8■■□□□ 1.08
YIF1B-203ENST00000339413 CCDC88AQ3V6T2 1871 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 H7C1W4 665 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 GCKRQ14397 625 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 BEND3Q5T5X7 828 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 ABCC4O15439 1325 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
YIF1B-203ENST00000339413 TAF1P21675 1872 aa21.78■■□□□ 1.08
YIF1B-203ENST00000339413 CCDC93Q567U6 631 aa21.78■■□□□ 1.08
YIF1B-203ENST00000339413 SNED1Q8TER0 1413 aa21.78■■□□□ 1.08
YIF1B-203ENST00000339413 PDE8AO60658 829 aa21.77■■□□□ 1.08
YIF1B-203ENST00000339413 HSP90B1P14625 803 aaKnown RBP21.77■■□□□ 1.08
YIF1B-203ENST00000339413 LMNB1P20700 586 aa21.77■■□□□ 1.08
YIF1B-203ENST00000339413 DDX46Q7L014 1031 aaKnown RBP21.77■■□□□ 1.08
YIF1B-203ENST00000339413 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
YIF1B-203ENST00000339413 RNF181Q9P0P0 153 aa21.77■■□□□ 1.08
YIF1B-203ENST00000339413 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.07
YIF1B-203ENST00000339413 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
YIF1B-203ENST00000339413 BBOX1O75936 387 aa21.76■■□□□ 1.07
YIF1B-203ENST00000339413 CASP7P55210 303 aa21.76■■□□□ 1.07
YIF1B-203ENST00000339413 GRAPQ13588 217 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms