RNA–Protein interactions for RNA: ENST00000339252.7

HAVCR1-201, Transcript of hepatitis A virus cellular receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HAVCR1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR1-201ENST00000339252 SSFA2P28290 1259 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 TBC1D9Q6ZT07 1266 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 PDE1AP54750 535 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
HAVCR1-201ENST00000339252 GRM8O00222 908 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
HAVCR1-201ENST00000339252 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 LRP5O75197 1615 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 COL15A1P39059 1388 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 APBB1O00213 710 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 TRAPPC3LQ5T215 181 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
HAVCR1-201ENST00000339252 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 A1BGP04217 495 aa13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 MX1P20591 662 aa13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 RFC4P35249 363 aa13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
HAVCR1-201ENST00000339252 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 MYL6BP14649 208 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 ADRA2BP18089 450 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 SDSP20132 328 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 ARXQ96QS3 562 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 REC8O95072 547 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
HAVCR1-201ENST00000339252 GCKRQ14397 625 aa13.15□□□□□ -0.3
HAVCR1-201ENST00000339252 SNX21Q969T3 373 aa13.15□□□□□ -0.3
HAVCR1-201ENST00000339252 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
HAVCR1-201ENST00000339252 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
HAVCR1-201ENST00000339252 ZPR1O75312 459 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 POLD1P28340 1107 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 EPB41L2O43491 1005 aaKnown RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 MYD88Q99836 296 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
HAVCR1-201ENST00000339252 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
HAVCR1-201ENST00000339252 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
HAVCR1-201ENST00000339252 A0A087WZG4 1122 aa13.12□□□□□ -0.31
HAVCR1-201ENST00000339252 ERC2O15083 957 aa13.12□□□□□ -0.31
HAVCR1-201ENST00000339252 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
HAVCR1-201ENST00000339252 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 PTGER2P43116 358 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 G3BP1Q13283 466 aaKnown RBP eCLIP13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 GYS1P13807 737 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
HAVCR1-201ENST00000339252 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
HAVCR1-201ENST00000339252 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
HAVCR1-201ENST00000339252 NARFQ9UHQ1 456 aa13.1□□□□□ -0.31
HAVCR1-201ENST00000339252 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
HAVCR1-201ENST00000339252 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
HAVCR1-201ENST00000339252 RABEP1Q15276 862 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms