RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 STK3Q13188 491 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 RUFY3Q7L099 469 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 GOLGB1Q14789 3259 aaKnown RBP10.69□□□□□ -0.7
SNCA-201ENST00000336904 CYP2E1P05181 493 aaPredicted RBP10.69□□□□□ -0.7
SNCA-201ENST00000336904 TIMM10P62072 90 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 L1TD1Q5T7N2 865 aaKnown RBP10.69□□□□□ -0.7
SNCA-201ENST00000336904 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
SNCA-201ENST00000336904 NUCB2P80303 420 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 HSP90AB3PQ58FF7 597 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 ASAP1Q9ULH1 1129 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 CAMTA1Q9Y6Y1 1673 aa10.69□□□□□ -0.7
SNCA-201ENST00000336904 GADD45BO75293 160 aaPredicted RBP10.68□□□□□ -0.7
SNCA-201ENST00000336904 FOSBP53539 338 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 MTX1Q13505 466 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 RNF214Q8ND24 703 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 LRRC2Q9BYS8 371 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
SNCA-201ENST00000336904 A0A0G2JLW4 131 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 FAM177BA6PVY3 158 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 GPTP24298 496 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 PTPN12Q05209 780 aaKnown RBP10.68□□□□□ -0.7
SNCA-201ENST00000336904 LRRC24Q50LG9 513 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 MPNDQ8N594 471 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 RBM8AQ9Y5S9 174 aaKnown RBP10.68□□□□□ -0.7
SNCA-201ENST00000336904 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
SNCA-201ENST00000336904 PUS3Q9BZE2 481 aaKnown RBP10.68□□□□□ -0.7
SNCA-201ENST00000336904 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
SNCA-201ENST00000336904 SYCE3A1L190 88 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
SNCA-201ENST00000336904 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 KIF1AQ12756 1690 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 SCN11AQ9UI33 1791 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 FAM173BQ6P4H8 233 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 DNAJC5Q9H3Z4 198 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 TMEM63CQ9P1W3 806 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 WDR17Q8IZU2 1322 aa10.67□□□□□ -0.7
SNCA-201ENST00000336904 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 FERMT3Q86UX7 667 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 FAM89AQ96GI7 184 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 TTC41PQ6P2S7 1318 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 COL18A1P39060 1754 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
SNCA-201ENST00000336904 IL2RBP14784 551 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 CNPY2Q9Y2B0 182 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 AOX1Q06278 1338 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
SNCA-201ENST00000336904 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
SNCA-201ENST00000336904 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
SNCA-201ENST00000336904 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 ERC1Q8IUD2 1116 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
SNCA-201ENST00000336904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
SNCA-201ENST00000336904 GOLIM4O00461 696 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 FIBPO43427 364 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 MRE11P49959 708 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 CREB3L3Q68CJ9 461 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.7
SNCA-201ENST00000336904 ADAMTS2O95450 1211 aa10.65□□□□□ -0.71
SNCA-201ENST00000336904 CWC22Q9HCG8 908 aaKnown RBP10.65□□□□□ -0.71
SNCA-201ENST00000336904 ERBB4Q15303 1308 aa10.65□□□□□ -0.71
SNCA-201ENST00000336904 PI16Q6UXB8 463 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 TTC14Q96N46 770 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 CHMP4AQ9BY43 222 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 PCDH11XQ9BZA7 1347 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 PCDH11YQ9BZA8 1340 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 COL15A1P39059 1388 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 TCHHQ07283 1943 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 BRD1O95696 1058 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 ANAPC15P60006 121 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 ST3GAL1Q11201 340 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 CUL4AQ13619 759 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 ME3Q16798 604 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 VPS53Q5VIR6 699 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 PLBD2Q8NHP8 589 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 RBSNQ9H1K0 784 aa10.64□□□□□ -0.71
SNCA-201ENST00000336904 NAP1L2Q9ULW6 460 aaPredicted RBP10.64□□□□□ -0.71
SNCA-201ENST00000336904 AFDNP55196 1824 aaKnown RBP10.64□□□□□ -0.71
SNCA-201ENST00000336904 OVOS2A0A0G2JMS6 1433 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 UTYO14607 1347 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 SLC27A2O14975 620 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 TPCN1Q9ULQ1 816 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 GJB2P29033 226 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 NASPP49321 788 aaPredicted RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 FOXO4P98177 505 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 SKOR2Q2VWA4 1001 aaPredicted RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 RUFY2Q8WXA3 655 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 PIGBQ92521 554 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms