RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 SRGNP10124 158 aa23.37■■□□□ 1.33
ATP6V0C-201ENST00000330398 FLIIQ13045 1269 aa23.37■■□□□ 1.33
ATP6V0C-201ENST00000330398 ERFEQ4G0M1 354 aa23.37■■□□□ 1.33
ATP6V0C-201ENST00000330398 METTL22Q9BUU2 404 aaPredicted RBP23.37■■□□□ 1.33
ATP6V0C-201ENST00000330398 PI4KAP2A4QPH2 592 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 CT47B1P0C2W7 299 aaPredicted RBP23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 STYK1Q6J9G0 422 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 NUTM1Q86Y26 1132 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 PI4KAP1Q8N8J0 262 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 BCS1LQ9Y276 419 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 ARFGEF2Q9Y6D5 1785 aa23.36■■□□□ 1.33
ATP6V0C-201ENST00000330398 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
ATP6V0C-201ENST00000330398 MASTLQ96GX5 879 aa23.35■■□□□ 1.33
ATP6V0C-201ENST00000330398 CRY2Q49AN0 593 aa23.34■■□□□ 1.33
ATP6V0C-201ENST00000330398 MAP3K2Q9Y2U5 619 aa23.34■■□□□ 1.33
ATP6V0C-201ENST00000330398 ADCY9O60503 1353 aa23.34■■□□□ 1.33
ATP6V0C-201ENST00000330398 ABCC12Q96J65 1359 aa23.34■■□□□ 1.33
ATP6V0C-201ENST00000330398 ARFGEF1Q9Y6D6 1849 aa23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 ATP5J2-PTCD1G3V325 749 aa23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 NPR1P16066 1061 aa23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 CCDC191Q8NCU4 936 aa23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 WWC3Q9ULE0 1092 aa23.33■■□□□ 1.33
ATP6V0C-201ENST00000330398 CNKSR1Q969H4 720 aa23.32■■□□□ 1.32
ATP6V0C-201ENST00000330398 MYD88Q99836 296 aa23.32■■□□□ 1.32
ATP6V0C-201ENST00000330398 SH3TC1Q8TE82 1336 aa23.32■■□□□ 1.32
ATP6V0C-201ENST00000330398 COL11A2P13942 1736 aaPredicted RBP23.31■■□□□ 1.32
ATP6V0C-201ENST00000330398 ZNF622Q969S3 477 aaKnown RBP eCLIP23.31■■□□□ 1.32
ATP6V0C-201ENST00000330398 CHD4Q14839 1912 aa23.31■■□□□ 1.32
ATP6V0C-201ENST00000330398 HOXA10P31260 410 aaPredicted RBP23.3■■□□□ 1.32
ATP6V0C-201ENST00000330398 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
ATP6V0C-201ENST00000330398 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
ATP6V0C-201ENST00000330398 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
ATP6V0C-201ENST00000330398 NEXNQ0ZGT2 675 aa23.29■■□□□ 1.32
ATP6V0C-201ENST00000330398 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
ATP6V0C-201ENST00000330398 NLRP3Q96P20 1036 aa23.29■■□□□ 1.32
ATP6V0C-201ENST00000330398 IGKV5-2P06315 115 aa23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 SYNE4Q8N205 404 aa23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 ZBTB38Q8NAP3 1195 aaPredicted RBP23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 DNAAF4Q8WXU2 420 aa23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 CWC25Q9NXE8 425 aaPredicted RBP23.28■■□□□ 1.32
ATP6V0C-201ENST00000330398 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
ATP6V0C-201ENST00000330398 FAM89AQ96GI7 184 aa23.27■■□□□ 1.32
ATP6V0C-201ENST00000330398 TNRC6CQ9HCJ0 1690 aaKnown RBP23.27■■□□□ 1.32
ATP6V0C-201ENST00000330398 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
ATP6V0C-201ENST00000330398 C3orf67Q6ZVT6 689 aa23.26■■□□□ 1.31
ATP6V0C-201ENST00000330398 NEURL1BA8MQ27 555 aa23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 HCLS1P14317 486 aaPredicted RBP23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 HSP90B1P14625 803 aaKnown RBP23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 BRPF1P55201 1214 aaPredicted RBP23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 ARHGAP27Q6ZUM4 889 aa23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 C7orf43Q8WVR3 580 aa23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
ATP6V0C-201ENST00000330398 RPGRQ92834 1020 aaKnown RBP23.24■■□□□ 1.31
ATP6V0C-201ENST00000330398 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
ATP6V0C-201ENST00000330398 SF3B3Q15393 1217 aaKnown RBP23.23■■□□□ 1.31
ATP6V0C-201ENST00000330398 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
ATP6V0C-201ENST00000330398 PTPRCP08575 1304 aa23.23■■□□□ 1.31
ATP6V0C-201ENST00000330398 IRS4O14654 1257 aaPredicted RBP23.22■■□□□ 1.31
ATP6V0C-201ENST00000330398 YY1P25490 414 aa23.22■■□□□ 1.31
ATP6V0C-201ENST00000330398 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
ATP6V0C-201ENST00000330398 SOGA3Q5TF21 947 aa23.22■■□□□ 1.31
ATP6V0C-201ENST00000330398 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
ATP6V0C-201ENST00000330398 H7C1W4 665 aa23.21■■□□□ 1.31
ATP6V0C-201ENST00000330398 C21orf2O43822 256 aa23.21■■□□□ 1.31
ATP6V0C-201ENST00000330398 GCKRQ14397 625 aa23.21■■□□□ 1.31
ATP6V0C-201ENST00000330398 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
ATP6V0C-201ENST00000330398 DDX60Q8IY21 1712 aaKnown RBP23.2■■□□□ 1.3
ATP6V0C-201ENST00000330398 F6X3S4 739 aa23.2■■□□□ 1.3
ATP6V0C-201ENST00000330398 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
ATP6V0C-201ENST00000330398 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
ATP6V0C-201ENST00000330398 LAMB2P55268 1798 aa23.19■■□□□ 1.3
ATP6V0C-201ENST00000330398 PDE8AO60658 829 aa23.18■■□□□ 1.3
ATP6V0C-201ENST00000330398 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
ATP6V0C-201ENST00000330398 CC2D2BQ6DHV5 1058 aa23.18■■□□□ 1.3
ATP6V0C-201ENST00000330398 LTBP3Q9NS15 1303 aa23.17■■□□□ 1.3
ATP6V0C-201ENST00000330398 ALDH1L1O75891 902 aa23.17■■□□□ 1.3
ATP6V0C-201ENST00000330398 BBOX1O75936 387 aa23.17■■□□□ 1.3
ATP6V0C-201ENST00000330398 CASP7P55210 303 aa23.17■■□□□ 1.3
ATP6V0C-201ENST00000330398 BCL2L13Q9BXK5 485 aa23.17■■□□□ 1.3
ATP6V0C-201ENST00000330398 NFKBIEO00221 500 aa23.16■■□□□ 1.3
ATP6V0C-201ENST00000330398 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
ATP6V0C-201ENST00000330398 DDX46Q7L014 1031 aaKnown RBP23.16■■□□□ 1.3
ATP6V0C-201ENST00000330398 FER1L6Q2WGJ9 1857 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 ABCC4O15439 1325 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 CCDC93Q567U6 631 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 RTKN2Q8IZC4 609 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 PLA2G12BQ9BX93 195 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 ZNF219Q9P2Y4 722 aaPredicted RBP23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 CACNA1SQ13698 1873 aa23.15■■□□□ 1.3
ATP6V0C-201ENST00000330398 SBF1O95248 1867 aa23.14■■□□□ 1.29
ATP6V0C-201ENST00000330398 GRAPQ13588 217 aa23.14■■□□□ 1.29
ATP6V0C-201ENST00000330398 GRAPLQ8TC17 118 aaPredicted RBP23.14■■□□□ 1.29
ATP6V0C-201ENST00000330398 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.29
ATP6V0C-201ENST00000330398 SRCIN1Q9C0H9 1055 aa23.14■■□□□ 1.29
ATP6V0C-201ENST00000330398 PPEF1O14829 653 aaPredicted RBP23.13■■□□□ 1.29
ATP6V0C-201ENST00000330398 LMNB1P20700 586 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms