RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 GPTP24298 496 aa17.72■□□□□ 0.43
GTF3C6-201ENST00000329970 ZEB1P37275 1124 aaPredicted RBP17.72■□□□□ 0.43
GTF3C6-201ENST00000329970 GRIPAP1Q4V328 841 aa17.72■□□□□ 0.43
GTF3C6-201ENST00000329970 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
GTF3C6-201ENST00000329970 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
GTF3C6-201ENST00000329970 SLC10A5Q5PT55 438 aa17.71■□□□□ 0.43
GTF3C6-201ENST00000329970 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
GTF3C6-201ENST00000329970 PSMD1Q99460 953 aa17.71■□□□□ 0.43
GTF3C6-201ENST00000329970 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
GTF3C6-201ENST00000329970 ANXA1P04083 346 aa17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 DNAJC5GQ8N7S2 189 aa17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
GTF3C6-201ENST00000329970 TCIRG1Q13488 830 aa17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 LAS1LQ9Y4W2 734 aaKnown RBP17.68■□□□□ 0.42
GTF3C6-201ENST00000329970 APAF1O14727 1248 aa17.67■□□□□ 0.42
GTF3C6-201ENST00000329970 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
GTF3C6-201ENST00000329970 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
GTF3C6-201ENST00000329970 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
GTF3C6-201ENST00000329970 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 GNAI1P63096 354 aa17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
GTF3C6-201ENST00000329970 IQCA1LA6NCM1 817 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 FZD9O00144 591 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 ADAMTSL1Q8N6G6 1762 aa17.65■□□□□ 0.42
GTF3C6-201ENST00000329970 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
GTF3C6-201ENST00000329970 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
GTF3C6-201ENST00000329970 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
GTF3C6-201ENST00000329970 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 VPS33BQ9H267 617 aa17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 TAF1P21675 1872 aa17.63■□□□□ 0.41
GTF3C6-201ENST00000329970 COL4A5P29400 1685 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 ISCA1Q9BUE6 129 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 ZNF541Q9H0D2 1346 aa17.62■□□□□ 0.41
GTF3C6-201ENST00000329970 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 JDP2Q8WYK2 163 aa17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 ABCC4O15439 1325 aa17.61■□□□□ 0.41
GTF3C6-201ENST00000329970 BBOX1O75936 387 aa17.6■□□□□ 0.41
GTF3C6-201ENST00000329970 CHADLQ6NUI6 762 aa17.6■□□□□ 0.41
GTF3C6-201ENST00000329970 GPC2Q8N158 579 aa17.6■□□□□ 0.41
GTF3C6-201ENST00000329970 TAF1DQ9H5J8 278 aaPredicted RBP17.6■□□□□ 0.41
GTF3C6-201ENST00000329970 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
GTF3C6-201ENST00000329970 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
GTF3C6-201ENST00000329970 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
GTF3C6-201ENST00000329970 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
GTF3C6-201ENST00000329970 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
GTF3C6-201ENST00000329970 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
GTF3C6-201ENST00000329970 SP8Q8IXZ3 490 aa17.58■□□□□ 0.4
GTF3C6-201ENST00000329970 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 GRAPQ13588 217 aa17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 SUPT20HQ8NEM7 779 aa17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
GTF3C6-201ENST00000329970 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 HTRA3P83110 453 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 PCNTO95613 3336 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 MYH3P11055 1940 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 DUOX1Q9NRD9 1551 aa17.56■□□□□ 0.4
GTF3C6-201ENST00000329970 IL16Q14005 1332 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 C8orf58Q8NAV2 365 aa17.55■□□□□ 0.4
GTF3C6-201ENST00000329970 EPHX2P34913 555 aa17.54■□□□□ 0.4
GTF3C6-201ENST00000329970 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms