RNA–Protein interactions for RNA: ENST00000325752.7

TUBD1-201, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TUBD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-201ENST00000325752 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
TUBD1-201ENST00000325752 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
TUBD1-201ENST00000325752 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 SYCE3A1L190 88 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 PRDM11Q9NQV5 511 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 LIMCH1Q9UPQ0 1083 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
TUBD1-201ENST00000325752 COL9A3Q14050 684 aaPredicted RBP13.99□□□□□ -0.17
TUBD1-201ENST00000325752 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
TUBD1-201ENST00000325752 TNS3Q68CZ2 1445 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 KIF1AQ12756 1690 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 TFCP2Q12800 502 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 CCDC83Q8IWF9 413 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 TCEANC2Q96MN5 208 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 CHGBP05060 677 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 ZNF445P59923 1031 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 RBSNQ9H1K0 784 aa13.98□□□□□ -0.17
TUBD1-201ENST00000325752 CCDC171Q6TFL3 1326 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 GADD45BO75293 160 aaPredicted RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 DNAJC2Q99543 621 aaKnown RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
TUBD1-201ENST00000325752 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
TUBD1-201ENST00000325752 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
TUBD1-201ENST00000325752 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
TUBD1-201ENST00000325752 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
TUBD1-201ENST00000325752 A1BGP04217 495 aa13.96□□□□□ -0.17
TUBD1-201ENST00000325752 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
TUBD1-201ENST00000325752 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
TUBD1-201ENST00000325752 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
TUBD1-201ENST00000325752 DBNLQ9UJU6 430 aaKnown RBP13.96□□□□□ -0.17
TUBD1-201ENST00000325752 C5P01031 1676 aa13.96□□□□□ -0.17
TUBD1-201ENST00000325752 NBPF26B4DH59 902 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 SYT1P21579 422 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 NBPF14Q5TI25 921 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.18
TUBD1-201ENST00000325752 LMBR1LQ6UX01 489 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 USP48Q86UV5 1035 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 NBPF15Q8N660 670 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 NECAB1Q8N987 351 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.18
TUBD1-201ENST00000325752 TAF6LQ9Y6J9 622 aa13.96□□□□□ -0.18
TUBD1-201ENST00000325752 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
TUBD1-201ENST00000325752 TNNI3KQ59H18 835 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 RNF214Q8ND24 703 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
TUBD1-201ENST00000325752 FPGT-TNNI3KV9GXZ4 949 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 ESPNB1AK53 854 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 RFX5P48382 616 aaPredicted RBP13.95□□□□□ -0.18
TUBD1-201ENST00000325752 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 CNPY2Q9Y2B0 182 aa13.95□□□□□ -0.18
TUBD1-201ENST00000325752 STX6O43752 255 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 GJB2P29033 226 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 DBNDD2Q9BQY9 259 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
TUBD1-201ENST00000325752 HIP1O00291 1037 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 SLC27A2O14975 620 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 MBD3O95983 291 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 ME3Q16798 604 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 VPS53Q5VIR6 699 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 STRCP1A6NGW2 1772 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 CCDC173Q0VFZ6 552 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 NEUROD6Q96NK8 337 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 SEC62Q99442 399 aaKnown RBP13.93□□□□□ -0.18
TUBD1-201ENST00000325752 ADAMTS7Q9UKP4 1686 aa13.93□□□□□ -0.18
TUBD1-201ENST00000325752 ZSCAN22P10073 491 aaPredicted RBP13.92□□□□□ -0.18
TUBD1-201ENST00000325752 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
TUBD1-201ENST00000325752 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 TPCN1Q9ULQ1 816 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 DCCP43146 1447 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 WDR17Q8IZU2 1322 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 FIBPO43427 364 aa13.92□□□□□ -0.18
TUBD1-201ENST00000325752 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
TUBD1-201ENST00000325752 STK3Q13188 491 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 SLFNL1Q499Z3 407 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 COL18A1P39060 1754 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 CLCN1P35523 988 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 EVA1CP58658 441 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 TIMM10P62072 90 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 ST3GAL1Q11201 340 aa13.91□□□□□ -0.18
TUBD1-201ENST00000325752 RABL6Q3YEC7 729 aaPredicted RBP13.91□□□□□ -0.18
TUBD1-201ENST00000325752 ZNF594Q96JF6 807 aaPredicted RBP13.91□□□□□ -0.18
TUBD1-201ENST00000325752 CASP7P55210 303 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms