RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 KAZALD1Q96I82 304 aa23.72■■□□□ 1.39
CRLF3-201ENST00000324238 LIG1P18858 919 aa23.72■■□□□ 1.39
CRLF3-201ENST00000324238 TMEM87AQ8NBN3 555 aa23.72■■□□□ 1.39
CRLF3-201ENST00000324238 RUFY2Q8WXA3 655 aa23.72■■□□□ 1.39
CRLF3-201ENST00000324238 DBF4Q9UBU7 674 aaPredicted RBP23.72■■□□□ 1.39
CRLF3-201ENST00000324238 KDM4AO75164 1064 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 TTC6Q86TZ1 520 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 ZSWIM6Q9HCJ5 1215 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 CCDC171Q6TFL3 1326 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 NECTIN1Q15223 517 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 HSP90AB4PQ58FF6 505 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 FSD1Q9BTV5 496 aa23.71■■□□□ 1.39
CRLF3-201ENST00000324238 GIGYF1O75420 1035 aaPredicted RBP23.7■■□□□ 1.39
CRLF3-201ENST00000324238 DDX11Q96FC9 970 aa23.7■■□□□ 1.39
CRLF3-201ENST00000324238 CEMIPQ8WUJ3 1361 aa23.7■■□□□ 1.38
CRLF3-201ENST00000324238 ZKSCAN1P17029 563 aaPredicted RBP23.7■■□□□ 1.38
CRLF3-201ENST00000324238 ZNF589Q86UQ0 364 aaPredicted RBP23.7■■□□□ 1.38
CRLF3-201ENST00000324238 VPS53Q5VIR6 699 aa23.7■■□□□ 1.38
CRLF3-201ENST00000324238 PKNOX2Q96KN3 472 aa23.7■■□□□ 1.38
CRLF3-201ENST00000324238 PRDM10Q9NQV6 1147 aa23.7■■□□□ 1.38
CRLF3-201ENST00000324238 TTC41PQ6P2S7 1318 aa23.69■■□□□ 1.38
CRLF3-201ENST00000324238 PYCARDQ9ULZ3 195 aa23.69■■□□□ 1.38
CRLF3-201ENST00000324238 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
CRLF3-201ENST00000324238 G3BP1Q13283 466 aaKnown RBP eCLIP23.69■■□□□ 1.38
CRLF3-201ENST00000324238 LRRC2Q9BYS8 371 aa23.69■■□□□ 1.38
CRLF3-201ENST00000324238 LUZP1Q86V48 1076 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 FAM184AQ8NB25 1140 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 SLC27A2O14975 620 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 KSR2Q6VAB6 950 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
CRLF3-201ENST00000324238 TERF1P54274 439 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 NFATC2IPQ8NCF5 419 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 ATP6V1DQ9Y5K8 247 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 CEBPZQ03701 1054 aaKnown RBP23.67■■□□□ 1.38
CRLF3-201ENST00000324238 EVI5LQ96CN4 794 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 FUCA2Q9BTY2 467 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 SLIT1O75093 1534 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 SLFNL1Q499Z3 407 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 EPHA10Q5JZY3 1008 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 LARP1Q6PKG0 1096 aaKnown RBP23.67■■□□□ 1.38
CRLF3-201ENST00000324238 CCDC129Q6ZRS4 1044 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 PIBF1Q8WXW3 757 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 GPATCH3Q96I76 525 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 BABAM1Q9NWV8 329 aa23.67■■□□□ 1.38
CRLF3-201ENST00000324238 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
CRLF3-201ENST00000324238 KCNF1Q9H3M0 494 aa23.66■■□□□ 1.38
CRLF3-201ENST00000324238 PXDNQ92626 1479 aa23.66■■□□□ 1.38
CRLF3-201ENST00000324238 JAK2O60674 1132 aa23.66■■□□□ 1.38
CRLF3-201ENST00000324238 ARHGEF25Q86VW2 580 aa23.66■■□□□ 1.38
CRLF3-201ENST00000324238 GRM8O00222 908 aa23.65■■□□□ 1.38
CRLF3-201ENST00000324238 UVSSAQ2YD98 709 aa23.65■■□□□ 1.38
CRLF3-201ENST00000324238 SEC62Q99442 399 aaKnown RBP23.65■■□□□ 1.38
CRLF3-201ENST00000324238 PXDNLA1KZ92 1463 aa23.65■■□□□ 1.38
CRLF3-201ENST00000324238 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
CRLF3-201ENST00000324238 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.38
CRLF3-201ENST00000324238 LRRC37A3O60309 1634 aa23.64■■□□□ 1.38
CRLF3-201ENST00000324238 DYNC1I1O14576 645 aa23.64■■□□□ 1.37
CRLF3-201ENST00000324238 DACT1Q9NYF0 836 aa23.64■■□□□ 1.37
CRLF3-201ENST00000324238 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.37
CRLF3-201ENST00000324238 PTCD1O75127 700 aaKnown RBP23.64■■□□□ 1.37
CRLF3-201ENST00000324238 BLOC1S2Q6QNY1 142 aa23.64■■□□□ 1.37
CRLF3-201ENST00000324238 MAP4K1Q92918 833 aa23.63■■□□□ 1.37
CRLF3-201ENST00000324238 ANKARQ7Z5J8 1434 aa23.63■■□□□ 1.37
CRLF3-201ENST00000324238 A0A087WWV3 80 aa23.63■■□□□ 1.37
CRLF3-201ENST00000324238 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
CRLF3-201ENST00000324238 MYD88Q99836 296 aa23.62■■□□□ 1.37
CRLF3-201ENST00000324238 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
CRLF3-201ENST00000324238 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
CRLF3-201ENST00000324238 SH2B1Q9NRF2 756 aaPredicted RBP23.62■■□□□ 1.37
CRLF3-201ENST00000324238 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
CRLF3-201ENST00000324238 EPB41L2O43491 1005 aaKnown RBP23.61■■□□□ 1.37
CRLF3-201ENST00000324238 PTGS1P23219 599 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 XAGE3Q8WTP9 111 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 DNAJC2Q99543 621 aaKnown RBP23.61■■□□□ 1.37
CRLF3-201ENST00000324238 NRBP1Q9UHY1 535 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 GOLGA6L4A6NEF3 574 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 MTX1Q13505 466 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 LETM1O95202 739 aaPredicted RBP23.61■■□□□ 1.37
CRLF3-201ENST00000324238 KRT85P78386 507 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 LRMPQ12912 555 aa23.61■■□□□ 1.37
CRLF3-201ENST00000324238 TOB2Q14106 344 aaPredicted RBP23.61■■□□□ 1.37
CRLF3-201ENST00000324238 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 AMOTQ4VCS5 1084 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 MYRIPQ8NFW9 859 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 NUP62CLQ9H1M0 184 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 USP16Q9Y5T5 823 aa23.6■■□□□ 1.37
CRLF3-201ENST00000324238 ZNF710Q8N1W2 664 aa23.59■■□□□ 1.37
CRLF3-201ENST00000324238 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
CRLF3-201ENST00000324238 ALDH1L1O75891 902 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 TYRO3Q06418 890 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 ANO6Q4KMQ2 910 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 DRC7Q8IY82 874 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 SPATA32Q96LK8 384 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 TM6SF1Q9BZW5 370 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 HOXB7P09629 217 aa23.58■■□□□ 1.37
CRLF3-201ENST00000324238 ERC1Q8IUD2 1116 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms