RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ABCC5O15440 1437 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 SYCP1Q15431 976 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 KNL1Q8NG31 2342 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 YEATS4O95619 227 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 TUBB2AQ13885 445 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CCDC186Q7Z3E2 898 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 TUBB2BQ9BVA1 445 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMC1A-201ENST00000322213 U3KPZ7 1027 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-201ENST00000322213 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 KIAA0586Q9BVV6 1533 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 UHRF1BP1Q6BDS2 1440 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 UBASH3AP57075 661 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 JADE2Q9NQC1 790 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 USO1O60763 962 aaKnown RBP8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CERS3Q8IU89 383 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
SMC1A-201ENST00000322213 TAF4BQ92750 862 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CDK5RAP3Q96JB5 506 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CLASP1Q7Z460 1538 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CCDC88CQ9P219 2028 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 PPP2R3AQ06190 1150 aa8.11□□□□□ -1.11
SMC1A-201ENST00000322213 CTAGE15A4D2H0 777 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 CTAGE8P0CG41 777 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 PAFAH1B1P43034 410 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 CTAGE6Q86UF2 777 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 CTAGE4Q8IX94 777 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 KIAA0556O60303 1618 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 FCHSD2O94868 740 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 RPAINQ86UA6 219 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 HMG20BQ9P0W2 317 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 MAP4K4O95819 1239 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 STMN4Q9H169 189 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 RPGRIP1LQ68CZ1 1315 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 SLC4A2P04920 1241 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 TMX1Q9H3N1 280 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 HYPKQ9NX55 129 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 CCDC69A6NI79 296 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 GLRX3O76003 335 aaKnown RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 SEC24BO95487 1268 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 ARID4AP29374 1257 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-201ENST00000322213 INPP5BP32019 993 aa8.1□□□□□ -1.11
SMC1A-201ENST00000322213 IBSPP21815 317 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 CHMP4BP1P59074 171 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 RBBP5Q15291 538 aaKnown RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 SPATS2Q86XZ4 545 aaKnown RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 F13A1P00488 732 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 GGT6Q6P531 493 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 CCDC114Q96M63 670 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 TSGA10Q9BZW7 698 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 MAATS1Q7Z4T9 603 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 KDM6BO15054 1643 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 MAGI1Q96QZ7 1491 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 BUB1BO60566 1050 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 NEBLO76041 1014 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 CLNS1AP54105 237 aaKnown RBP8.09□□□□□ -1.11
SMC1A-201ENST00000322213 KANK3Q6NY19 840 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 TCEAL9Q9UHQ7 104 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 FERMT3Q86UX7 667 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 CEP170Q5SW79 1584 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 AACSQ86V21 672 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 MIPOL1Q8TD10 442 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
SMC1A-201ENST00000322213 CCDC196A0A1B0GTZ2 297 aa8.09□□□□□ -1.12
SMC1A-201ENST00000322213 AP1ARQ63HQ0 302 aa8.09□□□□□ -1.12
SMC1A-201ENST00000322213 GAS2L2Q8NHY3 880 aa8.09□□□□□ -1.12
SMC1A-201ENST00000322213 TACO1Q9BSH4 297 aaKnown RBP8.09□□□□□ -1.12
SMC1A-201ENST00000322213 OAS2P29728 719 aaKnown RBP8.08□□□□□ -1.12
SMC1A-201ENST00000322213 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
SMC1A-201ENST00000322213 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 KIF5BP33176 963 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 GPR161Q8N6U8 529 aaKnown RBP8.08□□□□□ -1.12
SMC1A-201ENST00000322213 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 IQGAP1P46940 1657 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 C8orf76Q96K31 380 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 SYCP2Q9BX26 1530 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 FGFR1OPO95684 399 aaKnown RBP8.08□□□□□ -1.12
SMC1A-201ENST00000322213 VPS36Q86VN1 386 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.08□□□□□ -1.121e-9■■■■□ 24.7
SMC1A-201ENST00000322213 ATP11AP98196 1134 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 CTNNA3Q9UI47 895 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 JRKLQ9Y4A0 524 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 EVCP57679 992 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 WASHC4Q2M389 1173 aa8.08□□□□□ -1.12
SMC1A-201ENST00000322213 SH2D4BQ5SQS7 431 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms