RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
CCDC65-202ENST00000320516 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
CCDC65-202ENST00000320516 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
CCDC65-202ENST00000320516 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
CCDC65-202ENST00000320516 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
CCDC65-202ENST00000320516 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
CCDC65-202ENST00000320516 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
CCDC65-202ENST00000320516 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
CCDC65-202ENST00000320516 KIF3CO14782 793 aa12.85□□□□□ -0.35
CCDC65-202ENST00000320516 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
CCDC65-202ENST00000320516 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
CCDC65-202ENST00000320516 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
CCDC65-202ENST00000320516 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
CCDC65-202ENST00000320516 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
CCDC65-202ENST00000320516 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
CCDC65-202ENST00000320516 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
CCDC65-202ENST00000320516 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
CCDC65-202ENST00000320516 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
CCDC65-202ENST00000320516 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
CCDC65-202ENST00000320516 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
CCDC65-202ENST00000320516 SNED1Q8TER0 1413 aa12.83□□□□□ -0.35
CCDC65-202ENST00000320516 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
CCDC65-202ENST00000320516 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
CCDC65-202ENST00000320516 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
CCDC65-202ENST00000320516 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
CCDC65-202ENST00000320516 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
CCDC65-202ENST00000320516 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
CCDC65-202ENST00000320516 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
CCDC65-202ENST00000320516 CCDC93Q567U6 631 aa12.82□□□□□ -0.36
CCDC65-202ENST00000320516 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
CCDC65-202ENST00000320516 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
CCDC65-202ENST00000320516 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
CCDC65-202ENST00000320516 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
CCDC65-202ENST00000320516 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
CCDC65-202ENST00000320516 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
CCDC65-202ENST00000320516 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
CCDC65-202ENST00000320516 TRMT112Q9UI30 125 aaKnown RBP12.81□□□□□ -0.36
CCDC65-202ENST00000320516 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
CCDC65-202ENST00000320516 SH3TC1Q8TE82 1336 aa12.81□□□□□ -0.36
CCDC65-202ENST00000320516 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
CCDC65-202ENST00000320516 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
CCDC65-202ENST00000320516 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
CCDC65-202ENST00000320516 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
CCDC65-202ENST00000320516 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
CCDC65-202ENST00000320516 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC65-202ENST00000320516 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
CCDC65-202ENST00000320516 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
CCDC65-202ENST00000320516 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
CCDC65-202ENST00000320516 LAMB2P55268 1798 aa12.8□□□□□ -0.36
CCDC65-202ENST00000320516 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 RTKN2Q8IZC4 609 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
CCDC65-202ENST00000320516 VAMP4O75379 141 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 FAM89AQ96GI7 184 aa12.79□□□□□ -0.36
CCDC65-202ENST00000320516 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
CCDC65-202ENST00000320516 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
CCDC65-202ENST00000320516 ABCC4O15439 1325 aa12.78□□□□□ -0.36
CCDC65-202ENST00000320516 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
CCDC65-202ENST00000320516 G2E3Q7L622 706 aa12.78□□□□□ -0.36
CCDC65-202ENST00000320516 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.36
CCDC65-202ENST00000320516 TOMM70O94826 608 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.36
CCDC65-202ENST00000320516 KSR2Q6VAB6 950 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 PSMD1Q99460 953 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 MYD88Q99836 296 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 STK31Q9BXU1 1019 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 RRAGCQ9HB90 399 aa12.77□□□□□ -0.36
CCDC65-202ENST00000320516 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.36
CCDC65-202ENST00000320516 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 SF3B3Q15393 1217 aaKnown RBP12.76□□□□□ -0.37
CCDC65-202ENST00000320516 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
CCDC65-202ENST00000320516 CCDC191Q8NCU4 936 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 ATP6V0A2Q9Y487 856 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 BBOX1O75936 387 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
CCDC65-202ENST00000320516 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
CCDC65-202ENST00000320516 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
CCDC65-202ENST00000320516 POTECB2RU33 542 aa12.75□□□□□ -0.37
CCDC65-202ENST00000320516 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
CCDC65-202ENST00000320516 IGKV5-2P06315 115 aa12.75□□□□□ -0.37
CCDC65-202ENST00000320516 GRAPQ13588 217 aa12.75□□□□□ -0.37
CCDC65-202ENST00000320516 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
CCDC65-202ENST00000320516 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
CCDC65-202ENST00000320516 DDX46Q7L014 1031 aaKnown RBP12.75□□□□□ -0.37
CCDC65-202ENST00000320516 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
CCDC65-202ENST00000320516 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
CCDC65-202ENST00000320516 FLIIQ13045 1269 aa12.74□□□□□ -0.37
CCDC65-202ENST00000320516 SP8Q8IXZ3 490 aa12.74□□□□□ -0.37
CCDC65-202ENST00000320516 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
CCDC65-202ENST00000320516 CWC25Q9NXE8 425 aaPredicted RBP12.74□□□□□ -0.37
CCDC65-202ENST00000320516 COL4A5P29400 1685 aa12.74□□□□□ -0.37
CCDC65-202ENST00000320516 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms