RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 NPR1P16066 1061 aa26.33■■□□□ 1.81
TRPT1-201ENST00000317459 VAMP4O75379 141 aa26.32■■□□□ 1.8
TRPT1-201ENST00000317459 RNF123Q5XPI4 1314 aa26.32■■□□□ 1.8
TRPT1-201ENST00000317459 ATP5J2-PTCD1G3V325 749 aa26.31■■□□□ 1.8
TRPT1-201ENST00000317459 SLC4A2P04920 1241 aa26.31■■□□□ 1.8
TRPT1-201ENST00000317459 ISCA1Q9BUE6 129 aa26.31■■□□□ 1.8
TRPT1-201ENST00000317459 ZNF219Q9P2Y4 722 aaPredicted RBP26.31■■□□□ 1.8
TRPT1-201ENST00000317459 TRMT112Q9UI30 125 aaKnown RBP26.31■■□□□ 1.8
TRPT1-201ENST00000317459 RIC1Q4ADV7 1423 aa26.31■■□□□ 1.8
TRPT1-201ENST00000317459 PRPF40BQ6NWY9 871 aaKnown RBP26.3■■□□□ 1.8
TRPT1-201ENST00000317459 TNRC6CQ9HCJ0 1690 aaKnown RBP26.3■■□□□ 1.8
TRPT1-201ENST00000317459 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
TRPT1-201ENST00000317459 E9PSI1 815 aa26.29■■□□□ 1.8
TRPT1-201ENST00000317459 ZNF784Q8NCA9 323 aaPredicted RBP26.29■■□□□ 1.8
TRPT1-201ENST00000317459 C21orf2O43822 256 aa26.28■■□□□ 1.8
TRPT1-201ENST00000317459 RPGRQ92834 1020 aaKnown RBP26.28■■□□□ 1.8
TRPT1-201ENST00000317459 ZNF428Q96B54 188 aa26.28■■□□□ 1.8
TRPT1-201ENST00000317459 NLRP3Q96P20 1036 aa26.28■■□□□ 1.8
TRPT1-201ENST00000317459 MYD88Q99836 296 aa26.28■■□□□ 1.8
TRPT1-201ENST00000317459 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
TRPT1-201ENST00000317459 CRY2Q49AN0 593 aa26.27■■□□□ 1.8
TRPT1-201ENST00000317459 SLC10A5Q5PT55 438 aa26.27■■□□□ 1.8
TRPT1-201ENST00000317459 ALDH1B1P30837 517 aa26.26■■□□□ 1.79
TRPT1-201ENST00000317459 TRIM28Q13263 835 aaKnown RBP26.26■■□□□ 1.79
TRPT1-201ENST00000317459 KSR2Q6VAB6 950 aa26.26■■□□□ 1.79
TRPT1-201ENST00000317459 G2E3Q7L622 706 aa26.26■■□□□ 1.79
TRPT1-201ENST00000317459 MAP3K2Q9Y2U5 619 aa26.26■■□□□ 1.79
TRPT1-201ENST00000317459 METTL22Q9BUU2 404 aaPredicted RBP26.25■■□□□ 1.79
TRPT1-201ENST00000317459 PI4KAP2A4QPH2 592 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 HCLS1P14317 486 aaPredicted RBP26.24■■□□□ 1.79
TRPT1-201ENST00000317459 RASSF7Q02833 373 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 SLFN5Q08AF3 891 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 FLIIQ13045 1269 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 SOGA3Q5TF21 947 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 C9orf131Q5VYM1 1079 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 C3orf67Q6ZVT6 689 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 SYNE4Q8N205 404 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 PI4KAP1Q8N8J0 262 aa26.24■■□□□ 1.79
TRPT1-201ENST00000317459 RBM17Q96I25 401 aaKnown RBP26.24■■□□□ 1.79
TRPT1-201ENST00000317459 CACNA1SQ13698 1873 aa26.23■■□□□ 1.79
TRPT1-201ENST00000317459 SLX4Q8IY92 1834 aa26.23■■□□□ 1.79
TRPT1-201ENST00000317459 ADCY9O60503 1353 aa26.22■■□□□ 1.79
TRPT1-201ENST00000317459 HOXA10P31260 410 aaPredicted RBP26.22■■□□□ 1.79
TRPT1-201ENST00000317459 NEXNQ0ZGT2 675 aa26.22■■□□□ 1.79
TRPT1-201ENST00000317459 FKBP5Q13451 457 aaPredicted RBP26.22■■□□□ 1.79
TRPT1-201ENST00000317459 FAM89AQ96GI7 184 aa26.22■■□□□ 1.79
TRPT1-201ENST00000317459 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
TRPT1-201ENST00000317459 CCDC191Q8NCU4 936 aa26.21■■□□□ 1.79
TRPT1-201ENST00000317459 CDCA7LQ96GN5 454 aa26.21■■□□□ 1.79
TRPT1-201ENST00000317459 CWC25Q9NXE8 425 aaPredicted RBP26.21■■□□□ 1.79
TRPT1-201ENST00000317459 NFKBIEO00221 500 aa26.2■■□□□ 1.78
TRPT1-201ENST00000317459 RTL5Q5HYW3 569 aaPredicted RBP26.2■■□□□ 1.78
TRPT1-201ENST00000317459 CRAMP1Q96RY5 1269 aa26.2■■□□□ 1.78
TRPT1-201ENST00000317459 LMNB1P20700 586 aa26.19■■□□□ 1.78
TRPT1-201ENST00000317459 CCDC93Q567U6 631 aa26.19■■□□□ 1.78
TRPT1-201ENST00000317459 C7orf43Q8WVR3 580 aa26.19■■□□□ 1.78
TRPT1-201ENST00000317459 ZBTB38Q8NAP3 1195 aaPredicted RBP26.18■■□□□ 1.78
TRPT1-201ENST00000317459 TAOK3Q9H2K8 898 aa26.18■■□□□ 1.78
TRPT1-201ENST00000317459 CACNA1FO60840 1977 aa26.18■■□□□ 1.78
TRPT1-201ENST00000317459 IRS4O14654 1257 aaPredicted RBP26.17■■□□□ 1.78
TRPT1-201ENST00000317459 ZNF526Q8TF50 670 aaPredicted RBP26.17■■□□□ 1.78
TRPT1-201ENST00000317459 HSP90B1P14625 803 aaKnown RBP26.16■■□□□ 1.78
TRPT1-201ENST00000317459 PPEF1O14829 653 aaPredicted RBP26.15■■□□□ 1.78
TRPT1-201ENST00000317459 PCCAP05165 728 aaPredicted RBP26.15■■□□□ 1.78
TRPT1-201ENST00000317459 IGKV5-2P06315 115 aa26.15■■□□□ 1.78
TRPT1-201ENST00000317459 DDX46Q7L014 1031 aaKnown RBP26.15■■□□□ 1.78
TRPT1-201ENST00000317459 DNAAF4Q8WXU2 420 aa26.15■■□□□ 1.78
TRPT1-201ENST00000317459 OLFM4Q6UX06 510 aa26.14■■□□□ 1.78
TRPT1-201ENST00000317459 RTKN2Q8IZC4 609 aa26.14■■□□□ 1.78
TRPT1-201ENST00000317459 GPBP1L1Q9HC44 474 aaPredicted RBP26.14■■□□□ 1.78
TRPT1-201ENST00000317459 ABCC4O15439 1325 aa26.14■■□□□ 1.77
TRPT1-201ENST00000317459 LTBP3Q9NS15 1303 aa26.14■■□□□ 1.77
TRPT1-201ENST00000317459 SBF1O95248 1867 aa26.13■■□□□ 1.77
TRPT1-201ENST00000317459 FER1L6Q2WGJ9 1857 aa26.13■■□□□ 1.77
TRPT1-201ENST00000317459 LAMB2P55268 1798 aa26.13■■□□□ 1.77
TRPT1-201ENST00000317459 PRELPP51888 382 aa26.13■■□□□ 1.77
TRPT1-201ENST00000317459 HNRNPUQ00839 825 aaKnown RBP eCLIP26.13■■□□□ 1.77
TRPT1-201ENST00000317459 CWF19L2Q2TBE0 894 aaKnown RBP26.13■■□□□ 1.77
TRPT1-201ENST00000317459 CC2D2BQ6DHV5 1058 aa26.13■■□□□ 1.77
TRPT1-201ENST00000317459 TRMT2AQ8IZ69 625 aaKnown RBP26.13■■□□□ 1.77
TRPT1-201ENST00000317459 DDX60Q8IY21 1712 aaKnown RBP26.13■■□□□ 1.77
TRPT1-201ENST00000317459 NEURL1BA8MQ27 555 aa26.12■■□□□ 1.77
TRPT1-201ENST00000317459 JARID2Q92833 1246 aaPredicted RBP26.12■■□□□ 1.77
TRPT1-201ENST00000317459 TMX4Q9H1E5 349 aaPredicted RBP26.12■■□□□ 1.77
TRPT1-201ENST00000317459 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRPT1-201ENST00000317459 SF3B3Q15393 1217 aaKnown RBP26.11■■□□□ 1.77
TRPT1-201ENST00000317459 GRAPQ13588 217 aa26.1■■□□□ 1.77
TRPT1-201ENST00000317459 GRAPLQ8TC17 118 aaPredicted RBP26.1■■□□□ 1.77
TRPT1-201ENST00000317459 ZC3H4Q9UPT8 1303 aaKnown RBP26.1■■□□□ 1.77
TRPT1-201ENST00000317459 F6X3S4 739 aa26.09■■□□□ 1.77
TRPT1-201ENST00000317459 BBOX1O75936 387 aa26.09■■□□□ 1.77
TRPT1-201ENST00000317459 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
TRPT1-201ENST00000317459 PDE8AO60658 829 aa26.08■■□□□ 1.77
TRPT1-201ENST00000317459 GRIPAP1Q4V328 841 aa26.08■■□□□ 1.77
TRPT1-201ENST00000317459 MRPL50Q8N5N7 158 aaKnown RBP26.08■■□□□ 1.77
TRPT1-201ENST00000317459 ATP6V0A2Q9Y487 856 aa26.08■■□□□ 1.77
TRPT1-201ENST00000317459 CDHR2Q9BYE9 1310 aa26.08■■□□□ 1.77
TRPT1-201ENST00000317459 GCKRQ14397 625 aa26.07■■□□□ 1.76
TRPT1-201ENST00000317459 SSH1Q8WYL5 1049 aa26.07■■□□□ 1.76
TRPT1-201ENST00000317459 CT47B1P0C2W7 299 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms