RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PI4KAP1Q8N8J0 262 aa19.36■□□□□ 0.69
CACFD1-202ENST00000316948 ZSCAN31Q96LW9 406 aaPredicted RBP19.36■□□□□ 0.69
CACFD1-202ENST00000316948 FEZ1Q99689 392 aa19.36■□□□□ 0.69
CACFD1-202ENST00000316948 LGR6Q9HBX8 967 aa19.36■□□□□ 0.69
CACFD1-202ENST00000316948 KCNQ3O43525 872 aa19.35■□□□□ 0.69
CACFD1-202ENST00000316948 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
CACFD1-202ENST00000316948 OGFRQ9NZT2 677 aa19.35■□□□□ 0.69
CACFD1-202ENST00000316948 KCNJ4P48050 445 aa19.35■□□□□ 0.69
CACFD1-202ENST00000316948 TPD52L1Q16890 204 aaPredicted RBP19.35■□□□□ 0.69
CACFD1-202ENST00000316948 ZSCAN25Q6NSZ9 544 aa19.35■□□□□ 0.69
CACFD1-202ENST00000316948 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
CACFD1-202ENST00000316948 TCEANC2Q96MN5 208 aa19.35■□□□□ 0.69
CACFD1-202ENST00000316948 SMTNL1A8MU46 457 aa19.34■□□□□ 0.69
CACFD1-202ENST00000316948 TPCN1Q9ULQ1 816 aa19.34■□□□□ 0.69
CACFD1-202ENST00000316948 CCDC112Q8NEF3 446 aa19.34■□□□□ 0.69
CACFD1-202ENST00000316948 ZNF75DP51815 510 aa19.33■□□□□ 0.69
CACFD1-202ENST00000316948 COL9A3Q14050 684 aaPredicted RBP19.33■□□□□ 0.69
CACFD1-202ENST00000316948 BEND3Q5T5X7 828 aa19.33■□□□□ 0.69
CACFD1-202ENST00000316948 DNAAF4Q8WXU2 420 aa19.33■□□□□ 0.69
CACFD1-202ENST00000316948 ZSWIM6Q9HCJ5 1215 aa19.33■□□□□ 0.69
CACFD1-202ENST00000316948 N4BP2Q86UW6 1770 aaPredicted RBP19.33■□□□□ 0.69
CACFD1-202ENST00000316948 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
CACFD1-202ENST00000316948 RUFY2Q8WXA3 655 aa19.33■□□□□ 0.68
CACFD1-202ENST00000316948 BABAM1Q9NWV8 329 aa19.33■□□□□ 0.68
CACFD1-202ENST00000316948 CTNNA3Q9UI47 895 aa19.33■□□□□ 0.68
CACFD1-202ENST00000316948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.32■□□□□ 0.68
CACFD1-202ENST00000316948 SPATA32Q96LK8 384 aa19.32■□□□□ 0.68
CACFD1-202ENST00000316948 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
CACFD1-202ENST00000316948 CLIP2Q9UDT6 1046 aa19.32■□□□□ 0.68
CACFD1-202ENST00000316948 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
CACFD1-202ENST00000316948 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
CACFD1-202ENST00000316948 CACTINQ8WUQ7 758 aaKnown RBP19.32■□□□□ 0.68
CACFD1-202ENST00000316948 GLRX3O76003 335 aaKnown RBP19.31■□□□□ 0.68
CACFD1-202ENST00000316948 ZNF165P49910 485 aa19.31■□□□□ 0.68
CACFD1-202ENST00000316948 STK3Q13188 491 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 CCDC144BQ3MJ40 725 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 BICD2Q8TD16 824 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 NBPF6Q5VWK0 638 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 PLA2G4DQ86XP0 818 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 KLHL34Q8N239 644 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 NBPF4Q96M43 638 aa19.3■□□□□ 0.68
CACFD1-202ENST00000316948 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.3■□□□□ 0.68
CACFD1-202ENST00000316948 V9GYY5 206 aaPredicted RBP19.3■□□□□ 0.68
CACFD1-202ENST00000316948 NR1I2O75469 434 aa19.29■□□□□ 0.68
CACFD1-202ENST00000316948 CGNQ9P2M7 1197 aaKnown RBP19.29■□□□□ 0.68
CACFD1-202ENST00000316948 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
CACFD1-202ENST00000316948 RBM8AQ9Y5S9 174 aaKnown RBP19.29■□□□□ 0.68
CACFD1-202ENST00000316948 MARF1Q9Y4F3 1742 aaKnown RBP19.29■□□□□ 0.68
CACFD1-202ENST00000316948 KCNA6P17658 529 aa19.29■□□□□ 0.68
CACFD1-202ENST00000316948 PAXBP1Q9Y5B6 917 aa19.29■□□□□ 0.68
CACFD1-202ENST00000316948 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
CACFD1-202ENST00000316948 ARID5BQ14865 1188 aa19.28■□□□□ 0.68
CACFD1-202ENST00000316948 CREB3L3Q68CJ9 461 aa19.28■□□□□ 0.68
CACFD1-202ENST00000316948 LARP1Q6PKG0 1096 aaKnown RBP19.28■□□□□ 0.68
CACFD1-202ENST00000316948 TM6SF1Q9BZW5 370 aa19.28■□□□□ 0.68
CACFD1-202ENST00000316948 NECTIN1Q15223 517 aa19.28■□□□□ 0.68
CACFD1-202ENST00000316948 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
CACFD1-202ENST00000316948 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
CACFD1-202ENST00000316948 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
CACFD1-202ENST00000316948 FAM227BQ96M60 508 aa19.27■□□□□ 0.68
CACFD1-202ENST00000316948 SCAND2PQ9GZW5 306 aaPredicted RBP19.27■□□□□ 0.68
CACFD1-202ENST00000316948 DDX41Q9UJV9 622 aaKnown RBP19.27■□□□□ 0.68
CACFD1-202ENST00000316948 ADCY9O60503 1353 aa19.27■□□□□ 0.68
CACFD1-202ENST00000316948 ELP1O95163 1332 aa19.27■□□□□ 0.68
CACFD1-202ENST00000316948 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
CACFD1-202ENST00000316948 CLSTN2Q9H4D0 955 aa19.27■□□□□ 0.68
CACFD1-202ENST00000316948 DDX19AQ9NUU7 478 aaKnown RBP19.27■□□□□ 0.68
CACFD1-202ENST00000316948 CCDC171Q6TFL3 1326 aa19.27■□□□□ 0.67
CACFD1-202ENST00000316948 PDCP20941 246 aa19.27■□□□□ 0.67
CACFD1-202ENST00000316948 TDRD7Q8NHU6 1098 aaKnown RBP19.27■□□□□ 0.67
CACFD1-202ENST00000316948 USP27XA6NNY8 438 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 BTBD11A6QL63 1104 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
CACFD1-202ENST00000316948 SYCP1Q15431 976 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 HSP90AB4PQ58FF6 505 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 ECHDC1Q9NTX5 307 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 TEFQ10587 303 aa19.26■□□□□ 0.67
CACFD1-202ENST00000316948 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.25■□□□□ 0.67
CACFD1-202ENST00000316948 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
CACFD1-202ENST00000316948 C9orf78Q9NZ63 289 aaPredicted RBP19.25■□□□□ 0.67
CACFD1-202ENST00000316948 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 KIF18AQ8NI77 898 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 PGBD1Q96JS3 809 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 MAP3K2Q9Y2U5 619 aa19.25■□□□□ 0.67
CACFD1-202ENST00000316948 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
CACFD1-202ENST00000316948 CWF19L2Q2TBE0 894 aaKnown RBP19.24■□□□□ 0.67
CACFD1-202ENST00000316948 TRMT1Q9NXH9 659 aaKnown RBP19.24■□□□□ 0.67
CACFD1-202ENST00000316948 TAF6LQ9Y6J9 622 aa19.24■□□□□ 0.67
CACFD1-202ENST00000316948 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
CACFD1-202ENST00000316948 SLC27A2O14975 620 aa19.24■□□□□ 0.67
CACFD1-202ENST00000316948 BLOC1S2Q6QNY1 142 aa19.24■□□□□ 0.67
CACFD1-202ENST00000316948 DDX11Q96FC9 970 aa19.24■□□□□ 0.67
CACFD1-202ENST00000316948 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
CACFD1-202ENST00000316948 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
CACFD1-202ENST00000316948 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
CACFD1-202ENST00000316948 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms