RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 MYH16Q9H6N6 1097 aa23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 IBTKQ9P2D0 1353 aaPredicted RBP23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 SBF1O95248 1867 aa23.35■■□□□ 1.33
KLHDC4-202ENST00000316853 CCDC88AQ3V6T2 1871 aa23.35■■□□□ 1.33
KLHDC4-202ENST00000316853 CACNA1FO60840 1977 aa23.35■■□□□ 1.33
KLHDC4-202ENST00000316853 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
KLHDC4-202ENST00000316853 CNKSR1Q969H4 720 aa23.35■■□□□ 1.33
KLHDC4-202ENST00000316853 KLRG2A4D1S0 409 aaPredicted RBP23.34■■□□□ 1.33
KLHDC4-202ENST00000316853 ATP5J2-PTCD1G3V325 749 aa23.34■■□□□ 1.33
KLHDC4-202ENST00000316853 NPR1P16066 1061 aa23.34■■□□□ 1.33
KLHDC4-202ENST00000316853 ZNF521Q96K83 1311 aa23.33■■□□□ 1.33
KLHDC4-202ENST00000316853 C21orf2O43822 256 aa23.33■■□□□ 1.33
KLHDC4-202ENST00000316853 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
KLHDC4-202ENST00000316853 PRPF40BQ6NWY9 871 aaKnown RBP23.32■■□□□ 1.32
KLHDC4-202ENST00000316853 VAMP4O75379 141 aa23.31■■□□□ 1.32
KLHDC4-202ENST00000316853 DDX58O95786 925 aaKnown RBP23.31■■□□□ 1.32
KLHDC4-202ENST00000316853 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
KLHDC4-202ENST00000316853 LAMB2P55268 1798 aa23.3■■□□□ 1.32
KLHDC4-202ENST00000316853 RASSF7Q02833 373 aa23.3■■□□□ 1.32
KLHDC4-202ENST00000316853 SYNE4Q8N205 404 aa23.3■■□□□ 1.32
KLHDC4-202ENST00000316853 ISCA1Q9BUE6 129 aa23.3■■□□□ 1.32
KLHDC4-202ENST00000316853 FER1L6Q2WGJ9 1857 aa23.29■■□□□ 1.32
KLHDC4-202ENST00000316853 G2E3Q7L622 706 aa23.29■■□□□ 1.32
KLHDC4-202ENST00000316853 RPGRQ92834 1020 aaKnown RBP23.29■■□□□ 1.32
KLHDC4-202ENST00000316853 MYD88Q99836 296 aa23.29■■□□□ 1.32
KLHDC4-202ENST00000316853 RIC1Q4ADV7 1423 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 HCLS1P14317 486 aaPredicted RBP23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 CRY2Q49AN0 593 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 C9orf131Q5VYM1 1079 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 C3orf67Q6ZVT6 689 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 NLRP3Q96P20 1036 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 RNF123Q5XPI4 1314 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 SH3TC1Q8TE82 1336 aa23.28■■□□□ 1.32
KLHDC4-202ENST00000316853 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
KLHDC4-202ENST00000316853 SLC10A5Q5PT55 438 aa23.27■■□□□ 1.32
KLHDC4-202ENST00000316853 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
KLHDC4-202ENST00000316853 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
KLHDC4-202ENST00000316853 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
KLHDC4-202ENST00000316853 ADCY9O60503 1353 aa23.27■■□□□ 1.31
KLHDC4-202ENST00000316853 PI4KAP2A4QPH2 592 aa23.26■■□□□ 1.31
KLHDC4-202ENST00000316853 KSR2Q6VAB6 950 aa23.26■■□□□ 1.31
KLHDC4-202ENST00000316853 PI4KAP1Q8N8J0 262 aa23.26■■□□□ 1.31
KLHDC4-202ENST00000316853 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
KLHDC4-202ENST00000316853 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
KLHDC4-202ENST00000316853 METTL22Q9BUU2 404 aaPredicted RBP23.25■■□□□ 1.31
KLHDC4-202ENST00000316853 E9PSI1 815 aa23.24■■□□□ 1.31
KLHDC4-202ENST00000316853 NFKBIEO00221 500 aa23.24■■□□□ 1.31
KLHDC4-202ENST00000316853 TRIM28Q13263 835 aaKnown RBP23.24■■□□□ 1.31
KLHDC4-202ENST00000316853 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
KLHDC4-202ENST00000316853 TAF1P21675 1872 aa23.24■■□□□ 1.31
KLHDC4-202ENST00000316853 HOXA10P31260 410 aaPredicted RBP23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 FLIIQ13045 1269 aa23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 C7orf43Q8WVR3 580 aa23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 CDCA7LQ96GN5 454 aa23.23■■□□□ 1.31
KLHDC4-202ENST00000316853 LMNB1P20700 586 aa23.22■■□□□ 1.31
KLHDC4-202ENST00000316853 PRELPP51888 382 aa23.22■■□□□ 1.31
KLHDC4-202ENST00000316853 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
KLHDC4-202ENST00000316853 FKBP5Q13451 457 aaPredicted RBP23.22■■□□□ 1.31
KLHDC4-202ENST00000316853 DICER1Q9UPY3 1922 aaKnown RBP23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 CCDC93Q567U6 631 aa23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 CCDC191Q8NCU4 936 aa23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 CWC25Q9NXE8 425 aaPredicted RBP23.21■■□□□ 1.31
KLHDC4-202ENST00000316853 NEXNQ0ZGT2 675 aa23.2■■□□□ 1.3
KLHDC4-202ENST00000316853 JARID2Q92833 1246 aaPredicted RBP23.2■■□□□ 1.3
KLHDC4-202ENST00000316853 TAOK3Q9H2K8 898 aa23.2■■□□□ 1.3
KLHDC4-202ENST00000316853 TIAM2Q8IVF5 1701 aa23.19■■□□□ 1.3
KLHDC4-202ENST00000316853 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
KLHDC4-202ENST00000316853 ZBTB38Q8NAP3 1195 aaPredicted RBP23.19■■□□□ 1.3
KLHDC4-202ENST00000316853 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
KLHDC4-202ENST00000316853 ABCC4O15439 1325 aa23.17■■□□□ 1.3
KLHDC4-202ENST00000316853 PPEF1O14829 653 aaPredicted RBP23.17■■□□□ 1.3
KLHDC4-202ENST00000316853 CWF19L2Q2TBE0 894 aaKnown RBP23.17■■□□□ 1.3
KLHDC4-202ENST00000316853 DDX46Q7L014 1031 aaKnown RBP23.17■■□□□ 1.3
KLHDC4-202ENST00000316853 LTBP3Q9NS15 1303 aa23.16■■□□□ 1.3
KLHDC4-202ENST00000316853 PCCAP05165 728 aaPredicted RBP23.16■■□□□ 1.3
KLHDC4-202ENST00000316853 RTKN2Q8IZC4 609 aa23.16■■□□□ 1.3
KLHDC4-202ENST00000316853 DNAAF4Q8WXU2 420 aa23.16■■□□□ 1.3
KLHDC4-202ENST00000316853 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
KLHDC4-202ENST00000316853 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.29
KLHDC4-202ENST00000316853 F6X3S4 739 aa23.14■■□□□ 1.29
KLHDC4-202ENST00000316853 FKBP4Q02790 459 aaKnown RBP eCLIP23.14■■□□□ 1.29
KLHDC4-202ENST00000316853 MYH3P11055 1940 aa23.14■■□□□ 1.29
KLHDC4-202ENST00000316853 SF3B3Q15393 1217 aaKnown RBP23.13■■□□□ 1.29
KLHDC4-202ENST00000316853 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
KLHDC4-202ENST00000316853 TRMT2AQ8IZ69 625 aaKnown RBP23.13■■□□□ 1.29
KLHDC4-202ENST00000316853 TMX4Q9H1E5 349 aaPredicted RBP23.13■■□□□ 1.29
KLHDC4-202ENST00000316853 ZNF277Q9NRM2 450 aaPredicted RBP23.13■■□□□ 1.29
KLHDC4-202ENST00000316853 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
KLHDC4-202ENST00000316853 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
KLHDC4-202ENST00000316853 GRAPQ13588 217 aa23.12■■□□□ 1.29
KLHDC4-202ENST00000316853 GRAPLQ8TC17 118 aaPredicted RBP23.12■■□□□ 1.29
KLHDC4-202ENST00000316853 BBOX1O75936 387 aa23.11■■□□□ 1.29
KLHDC4-202ENST00000316853 ATP6V0A2Q9Y487 856 aa23.11■■□□□ 1.29
KLHDC4-202ENST00000316853 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
KLHDC4-202ENST00000316853 PDE8AO60658 829 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms