RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 SH2B1Q9NRF2 756 aaPredicted RBP23.5■■□□□ 1.35
AP3S1-201ENST00000316788 RBM27Q9P2N5 1060 aaKnown RBP23.5■■□□□ 1.35
AP3S1-201ENST00000316788 PDIA4P13667 645 aaKnown RBP23.49■■□□□ 1.35
AP3S1-201ENST00000316788 TATP17735 454 aaPredicted RBP23.49■■□□□ 1.35
AP3S1-201ENST00000316788 NOL8Q76FK4 1167 aaKnown RBP23.49■■□□□ 1.35
AP3S1-201ENST00000316788 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
AP3S1-201ENST00000316788 AACSQ86V21 672 aa23.49■■□□□ 1.35
AP3S1-201ENST00000316788 ZSCAN30Q86W11 494 aa23.49■■□□□ 1.35
AP3S1-201ENST00000316788 ZSWIM6Q9HCJ5 1215 aa23.49■■□□□ 1.35
AP3S1-201ENST00000316788 COL14A1Q05707 1796 aaKnown RBP23.49■■□□□ 1.35
AP3S1-201ENST00000316788 PRAMEF22A3QJZ6 481 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 SASH1O94885 1247 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 PHKG2P15735 406 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 NEXNQ0ZGT2 675 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
AP3S1-201ENST00000316788 PA2G4Q9UQ80 394 aaKnown RBP23.48■■□□□ 1.35
AP3S1-201ENST00000316788 PLCH1Q4KWH8 1693 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 CCDC171Q6TFL3 1326 aa23.48■■□□□ 1.35
AP3S1-201ENST00000316788 IGKV5-2P06315 115 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 NECTIN1Q15223 517 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 STRN4Q9NRL3 753 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 C5P01031 1676 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 SLIT2O94813 1529 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 ZSCAN22P10073 491 aaPredicted RBP23.47■■□□□ 1.35
AP3S1-201ENST00000316788 METTL22Q9BUU2 404 aaPredicted RBP23.47■■□□□ 1.35
AP3S1-201ENST00000316788 NSFL1CQ9UNZ2 370 aaKnown RBP23.47■■□□□ 1.35
AP3S1-201ENST00000316788 ATP6V1DQ9Y5K8 247 aa23.47■■□□□ 1.35
AP3S1-201ENST00000316788 NEURL1BA8MQ27 555 aa23.46■■□□□ 1.35
AP3S1-201ENST00000316788 RIC3Q7Z5B4 369 aa23.46■■□□□ 1.35
AP3S1-201ENST00000316788 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.46■■□□□ 1.35
AP3S1-201ENST00000316788 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.35
AP3S1-201ENST00000316788 RFX7Q2KHR2 1363 aa23.45■■□□□ 1.35
AP3S1-201ENST00000316788 FOXD4L5Q5VV16 416 aaPredicted RBP23.45■■□□□ 1.34
AP3S1-201ENST00000316788 IFNL2Q8IZJ0 200 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 FOXD4L4Q8WXT5 416 aaPredicted RBP23.45■■□□□ 1.34
AP3S1-201ENST00000316788 CYP46A1Q9Y6A2 500 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 SYCE3A1L190 88 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
AP3S1-201ENST00000316788 PTH1RQ03431 593 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 GCKRQ14397 625 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 FNBP4Q8N3X1 1017 aaPredicted RBP23.45■■□□□ 1.34
AP3S1-201ENST00000316788 MAP4K1Q92918 833 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 EAF2Q96CJ1 260 aaPredicted RBP23.45■■□□□ 1.34
AP3S1-201ENST00000316788 SMC3Q9UQE7 1217 aa23.45■■□□□ 1.34
AP3S1-201ENST00000316788 AFF2P51816 1311 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 MEGF6O75095 1541 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 ZKSCAN1P17029 563 aaPredicted RBP23.44■■□□□ 1.34
AP3S1-201ENST00000316788 CHAMP1Q96JM3 812 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 ALDH8A1Q9H2A2 487 aaPredicted RBP23.44■■□□□ 1.34
AP3S1-201ENST00000316788 PDRG1Q9NUG6 133 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 PKD1L3Q7Z443 1732 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
AP3S1-201ENST00000316788 STX6O43752 255 aa23.43■■□□□ 1.34
AP3S1-201ENST00000316788 LRP10Q7Z4F1 713 aa23.43■■□□□ 1.34
AP3S1-201ENST00000316788 DCAF5Q96JK2 942 aa23.43■■□□□ 1.34
AP3S1-201ENST00000316788 COPRSQ9NQ92 184 aa23.43■■□□□ 1.34
AP3S1-201ENST00000316788 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
AP3S1-201ENST00000316788 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 LETM1O95202 739 aaPredicted RBP23.42■■□□□ 1.34
AP3S1-201ENST00000316788 SYT1P21579 422 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 PSMA5P28066 241 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 EVA1CP58658 441 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 CSPP1Q1MSJ5 1256 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 PRPF40BQ6NWY9 871 aaKnown RBP23.42■■□□□ 1.34
AP3S1-201ENST00000316788 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 JAKMIP1Q96N16 626 aaKnown RBP23.42■■□□□ 1.34
AP3S1-201ENST00000316788 TSPY26PQ9H489 355 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 USP21Q9UK80 565 aa23.42■■□□□ 1.34
AP3S1-201ENST00000316788 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
AP3S1-201ENST00000316788 NRAPQ86VF7 1730 aa23.41■■□□□ 1.34
AP3S1-201ENST00000316788 F13A1P00488 732 aa23.41■■□□□ 1.34
AP3S1-201ENST00000316788 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
AP3S1-201ENST00000316788 NLRP2Q9NX02 1062 aa23.41■■□□□ 1.34
AP3S1-201ENST00000316788 RBM8AQ9Y5S9 174 aaKnown RBP23.41■■□□□ 1.34
AP3S1-201ENST00000316788 MCM5P33992 734 aa23.4■■□□□ 1.34
AP3S1-201ENST00000316788 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
AP3S1-201ENST00000316788 RABL6Q3YEC7 729 aaPredicted RBP23.4■■□□□ 1.34
AP3S1-201ENST00000316788 CREB3L3Q68CJ9 461 aa23.4■■□□□ 1.34
AP3S1-201ENST00000316788 FAM184AQ8NB25 1140 aa23.4■■□□□ 1.34
AP3S1-201ENST00000316788 NMIQ13287 307 aaPredicted RBP23.39■■□□□ 1.34
AP3S1-201ENST00000316788 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.34
AP3S1-201ENST00000316788 RNF20Q5VTR2 975 aa23.39■■□□□ 1.34
AP3S1-201ENST00000316788 NOL7Q9UMY1 257 aaKnown RBP23.39■■□□□ 1.34
AP3S1-201ENST00000316788 UBE2HP62256 183 aa23.39■■□□□ 1.33
AP3S1-201ENST00000316788 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
AP3S1-201ENST00000316788 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
AP3S1-201ENST00000316788 FMNL2Q96PY5 1086 aa23.39■■□□□ 1.33
AP3S1-201ENST00000316788 HMG20BQ9P0W2 317 aa23.39■■□□□ 1.33
AP3S1-201ENST00000316788 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.33
AP3S1-201ENST00000316788 SLC39A6Q13433 755 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 ANKRD1Q15327 319 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 UVSSAQ2YD98 709 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 CCDC183Q5T5S1 534 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 ANKRD13DQ6ZTN6 518 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 TICAM2Q86XR7 235 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 NFATC2IPQ8NCF5 419 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 NWD2Q9ULI1 1742 aa23.38■■□□□ 1.33
AP3S1-201ENST00000316788 ATP5JP18859 108 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 MSNP26038 577 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms