RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
RPA2-201ENST00000313433 PHAXQ9H814 394 aaKnown RBP23.75■■□□□ 1.39
RPA2-201ENST00000313433 ZNF521Q96K83 1311 aa23.75■■□□□ 1.39
RPA2-201ENST00000313433 NPR1P16066 1061 aa23.74■■□□□ 1.39
RPA2-201ENST00000313433 SLC51AQ86UW1 340 aa23.74■■□□□ 1.39
RPA2-201ENST00000313433 NLRP10Q86W26 655 aa23.74■■□□□ 1.39
RPA2-201ENST00000313433 TCIRG1Q13488 830 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 PARP10Q53GL7 1025 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 OLFM4Q6UX06 510 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 SYNE4Q8N205 404 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 PLBD2Q8NHP8 589 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 CNKSR1Q969H4 720 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 HYPKQ9NX55 129 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 TAF1P21675 1872 aa23.73■■□□□ 1.39
RPA2-201ENST00000313433 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
RPA2-201ENST00000313433 COL4A1P02462 1669 aa23.71■■□□□ 1.39
RPA2-201ENST00000313433 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
RPA2-201ENST00000313433 ISCA1Q9BUE6 129 aa23.71■■□□□ 1.39
RPA2-201ENST00000313433 ANKRD13DQ6ZTN6 518 aa23.7■■□□□ 1.38
RPA2-201ENST00000313433 PPP1R42Q7Z4L9 355 aa23.7■■□□□ 1.38
RPA2-201ENST00000313433 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
RPA2-201ENST00000313433 GPBP1L1Q9HC44 474 aaPredicted RBP23.7■■□□□ 1.38
RPA2-201ENST00000313433 HSP90AB3PQ58FF7 597 aa23.69■■□□□ 1.38
RPA2-201ENST00000313433 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
RPA2-201ENST00000313433 WDR63Q8IWG1 891 aa23.69■■□□□ 1.38
RPA2-201ENST00000313433 TCERG1O14776 1098 aaKnown RBP23.68■■□□□ 1.38
RPA2-201ENST00000313433 LTBP3Q9NS15 1303 aa23.67■■□□□ 1.38
RPA2-201ENST00000313433 ATP5J2-PTCD1G3V325 749 aa23.67■■□□□ 1.38
RPA2-201ENST00000313433 KIF3CO14782 793 aa23.67■■□□□ 1.38
RPA2-201ENST00000313433 LMNB1P20700 586 aa23.67■■□□□ 1.38
RPA2-201ENST00000313433 HOXA10P31260 410 aaPredicted RBP23.67■■□□□ 1.38
RPA2-201ENST00000313433 TWISTNBQ3B726 338 aaPredicted RBP23.67■■□□□ 1.38
RPA2-201ENST00000313433 C1QTNF8P60827 252 aa23.66■■□□□ 1.38
RPA2-201ENST00000313433 CACNA1FO60840 1977 aa23.65■■□□□ 1.38
RPA2-201ENST00000313433 RNF123Q5XPI4 1314 aa23.65■■□□□ 1.38
RPA2-201ENST00000313433 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
RPA2-201ENST00000313433 CCDC30Q5VVM6 783 aa23.65■■□□□ 1.38
RPA2-201ENST00000313433 G2E3Q7L622 706 aa23.65■■□□□ 1.38
RPA2-201ENST00000313433 NMRK2Q9NPI5 230 aa23.65■■□□□ 1.38
RPA2-201ENST00000313433 COL4A5P29400 1685 aa23.64■■□□□ 1.38
RPA2-201ENST00000313433 TAOK3Q9H2K8 898 aa23.63■■□□□ 1.37
RPA2-201ENST00000313433 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
RPA2-201ENST00000313433 SH3TC1Q8TE82 1336 aa23.62■■□□□ 1.37
RPA2-201ENST00000313433 LRRC37AA6NMS7 1700 aa23.62■■□□□ 1.37
RPA2-201ENST00000313433 EXOSC9Q06265 439 aaKnown RBP23.62■■□□□ 1.37
RPA2-201ENST00000313433 TRIM28Q13263 835 aaKnown RBP23.62■■□□□ 1.37
RPA2-201ENST00000313433 CCDC93Q567U6 631 aa23.62■■□□□ 1.37
RPA2-201ENST00000313433 ZC3H4Q9UPT8 1303 aaKnown RBP23.61■■□□□ 1.37
RPA2-201ENST00000313433 VAMP4O75379 141 aa23.61■■□□□ 1.37
RPA2-201ENST00000313433 ALDH1B1P30837 517 aa23.61■■□□□ 1.37
RPA2-201ENST00000313433 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
RPA2-201ENST00000313433 RIC3Q7Z5B4 369 aa23.61■■□□□ 1.37
RPA2-201ENST00000313433 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
RPA2-201ENST00000313433 CRAMP1Q96RY5 1269 aa23.61■■□□□ 1.37
RPA2-201ENST00000313433 ABCC4O15439 1325 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 SOGA3Q5TF21 947 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 FAM89AQ96GI7 184 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 NLRP3Q96P20 1036 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 MYD88Q99836 296 aa23.6■■□□□ 1.37
RPA2-201ENST00000313433 CDCA7LQ96GN5 454 aa23.59■■□□□ 1.37
RPA2-201ENST00000313433 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
RPA2-201ENST00000313433 RBM17Q96I25 401 aaKnown RBP23.58■■□□□ 1.37
RPA2-201ENST00000313433 METTL22Q9BUU2 404 aaPredicted RBP23.58■■□□□ 1.37
RPA2-201ENST00000313433 RTL5Q5HYW3 569 aaPredicted RBP23.57■■□□□ 1.36
RPA2-201ENST00000313433 ZNF277Q9NRM2 450 aaPredicted RBP23.57■■□□□ 1.36
RPA2-201ENST00000313433 MAP3K2Q9Y2U5 619 aa23.57■■□□□ 1.36
RPA2-201ENST00000313433 DUOX1Q9NRD9 1551 aa23.57■■□□□ 1.36
RPA2-201ENST00000313433 PI4KAP2A4QPH2 592 aa23.56■■□□□ 1.36
RPA2-201ENST00000313433 PPEF1O14829 653 aaPredicted RBP23.56■■□□□ 1.36
RPA2-201ENST00000313433 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
RPA2-201ENST00000313433 IGKV5-2P06315 115 aa23.56■■□□□ 1.36
RPA2-201ENST00000313433 PI4KAP1Q8N8J0 262 aa23.56■■□□□ 1.36
RPA2-201ENST00000313433 LTBP1Q14766 1721 aa23.56■■□□□ 1.36
RPA2-201ENST00000313433 KSR2Q6VAB6 950 aa23.55■■□□□ 1.36
RPA2-201ENST00000313433 STK31Q9BXU1 1019 aa23.55■■□□□ 1.36
RPA2-201ENST00000313433 GLTPD2A6NH11 291 aa23.54■■□□□ 1.36
RPA2-201ENST00000313433 POTECB2RU33 542 aa23.54■■□□□ 1.36
RPA2-201ENST00000313433 RTKN2Q8IZC4 609 aa23.54■■□□□ 1.36
RPA2-201ENST00000313433 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
RPA2-201ENST00000313433 MYH3P11055 1940 aa23.54■■□□□ 1.36
RPA2-201ENST00000313433 KDM2BQ8NHM5 1336 aa23.54■■□□□ 1.36
RPA2-201ENST00000313433 SLFN5Q08AF3 891 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 FLIIQ13045 1269 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 ZBTB38Q8NAP3 1195 aaPredicted RBP23.53■■□□□ 1.36
RPA2-201ENST00000313433 CCDC191Q8NCU4 936 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 PSMD1Q99460 953 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 CHMP4AQ9BY43 222 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 RRAGCQ9HB90 399 aa23.53■■□□□ 1.36
RPA2-201ENST00000313433 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
RPA2-201ENST00000313433 DDX58O95786 925 aaKnown RBP23.52■■□□□ 1.36
RPA2-201ENST00000313433 SF3B3Q15393 1217 aaKnown RBP23.52■■□□□ 1.36
RPA2-201ENST00000313433 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
RPA2-201ENST00000313433 ATP6V0A2Q9Y487 856 aa23.52■■□□□ 1.36
RPA2-201ENST00000313433 TRMT2AQ8IZ69 625 aaKnown RBP23.51■■□□□ 1.35
RPA2-201ENST00000313433 CWC25Q9NXE8 425 aaPredicted RBP23.51■■□□□ 1.35
RPA2-201ENST00000313433 PCCAP05165 728 aaPredicted RBP23.5■■□□□ 1.35
RPA2-201ENST00000313433 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms