RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PRELPP51888 382 aa15.5■□□□□ 0.07
SCFD1-201ENST00000311943 TRMT2AQ8IZ69 625 aaKnown RBP15.5■□□□□ 0.07
SCFD1-201ENST00000311943 COL4A1P02462 1669 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 ST5P78524 1137 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 FLIIQ13045 1269 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 ISCA1Q9BUE6 129 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
SCFD1-201ENST00000311943 E9PSI1 815 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 H0YIN7 160 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 STK31Q9BXU1 1019 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 SLX4Q8IY92 1834 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 RASSF7Q02833 373 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 ARHGAP27Q6ZUM4 889 aa15.48■□□□□ 0.07
SCFD1-201ENST00000311943 TRMT112Q9UI30 125 aaKnown RBP15.48■□□□□ 0.07
SCFD1-201ENST00000311943 TAF1P21675 1872 aa15.47■□□□□ 0.07
SCFD1-201ENST00000311943 C21orf2O43822 256 aa15.47■□□□□ 0.07
SCFD1-201ENST00000311943 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
SCFD1-201ENST00000311943 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
SCFD1-201ENST00000311943 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
SCFD1-201ENST00000311943 FKBP5Q13451 457 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-201ENST00000311943 CCDC85AQ96PX6 553 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-201ENST00000311943 YY1P25490 414 aa15.46■□□□□ 0.07
SCFD1-201ENST00000311943 PDE6BP35913 854 aa15.46■□□□□ 0.07
SCFD1-201ENST00000311943 KSR2Q6VAB6 950 aa15.46■□□□□ 0.07
SCFD1-201ENST00000311943 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
SCFD1-201ENST00000311943 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
SCFD1-201ENST00000311943 TTLL6Q8N841 843 aa15.45■□□□□ 0.06
SCFD1-201ENST00000311943 METTL22Q9BUU2 404 aaPredicted RBP15.45■□□□□ 0.06
SCFD1-201ENST00000311943 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
SCFD1-201ENST00000311943 PRPF40BQ6NWY9 871 aaKnown RBP15.44■□□□□ 0.06
SCFD1-201ENST00000311943 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
SCFD1-201ENST00000311943 PPP1R42Q7Z4L9 355 aa15.44■□□□□ 0.06
SCFD1-201ENST00000311943 TNNQ9UQP3 1299 aa15.44■□□□□ 0.06
SCFD1-201ENST00000311943 RGL2O15211 777 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 LAMB2P55268 1798 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 CRY2Q49AN0 593 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
SCFD1-201ENST00000311943 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
SCFD1-201ENST00000311943 DDX60Q8IY21 1712 aaKnown RBP15.42■□□□□ 0.06
SCFD1-201ENST00000311943 NFKBIEO00221 500 aa15.42■□□□□ 0.06
SCFD1-201ENST00000311943 HSP90AB3PQ58FF7 597 aa15.42■□□□□ 0.06
SCFD1-201ENST00000311943 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
SCFD1-201ENST00000311943 NEURL1BA8MQ27 555 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 C7orf43Q8WVR3 580 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 SLC10A5Q5PT55 438 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 DNAAF4Q8WXU2 420 aa15.41■□□□□ 0.06
SCFD1-201ENST00000311943 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
SCFD1-201ENST00000311943 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
SCFD1-201ENST00000311943 BCAR3O75815 825 aa15.4■□□□□ 0.06
SCFD1-201ENST00000311943 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
SCFD1-201ENST00000311943 NPR1P16066 1061 aa15.4■□□□□ 0.06
SCFD1-201ENST00000311943 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
SCFD1-201ENST00000311943 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-201ENST00000311943 CHD4Q14839 1912 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 ABCC4O15439 1325 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
SCFD1-201ENST00000311943 BEND3Q5T5X7 828 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 UBE3BQ7Z3V4 1068 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 CELF1Q92879 486 aaKnown RBP15.39■□□□□ 0.05
SCFD1-201ENST00000311943 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
SCFD1-201ENST00000311943 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
SCFD1-201ENST00000311943 IBTKQ9P2D0 1353 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-201ENST00000311943 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-201ENST00000311943 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
SCFD1-201ENST00000311943 C9orf131Q5VYM1 1079 aa15.38■□□□□ 0.05
SCFD1-201ENST00000311943 ZNF784Q8NCA9 323 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-201ENST00000311943 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
SCFD1-201ENST00000311943 NOB1Q9ULX3 412 aaKnown RBP15.38■□□□□ 0.05
SCFD1-201ENST00000311943 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
SCFD1-201ENST00000311943 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
SCFD1-201ENST00000311943 GCKRQ14397 625 aa15.37■□□□□ 0.05
SCFD1-201ENST00000311943 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
SCFD1-201ENST00000311943 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-201ENST00000311943 CASP7P55210 303 aa15.36■□□□□ 0.05
SCFD1-201ENST00000311943 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
SCFD1-201ENST00000311943 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-201ENST00000311943 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
SCFD1-201ENST00000311943 SBF1O95248 1867 aa15.35■□□□□ 0.05
SCFD1-201ENST00000311943 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
SCFD1-201ENST00000311943 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
SCFD1-201ENST00000311943 H7C1W4 665 aa15.35■□□□□ 0.05
SCFD1-201ENST00000311943 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
SCFD1-201ENST00000311943 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
SCFD1-201ENST00000311943 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
SCFD1-201ENST00000311943 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
SCFD1-201ENST00000311943 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
SCFD1-201ENST00000311943 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
SCFD1-201ENST00000311943 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
SCFD1-201ENST00000311943 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
SCFD1-201ENST00000311943 COL4A5P29400 1685 aa15.34■□□□□ 0.05
SCFD1-201ENST00000311943 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.05
SCFD1-201ENST00000311943 FER1L6Q2WGJ9 1857 aa15.33■□□□□ 0.04
SCFD1-201ENST00000311943 GREM2Q9H772 168 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 734.4 ms