RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
PAAF1-201ENST00000310571 SH2B1Q9NRF2 756 aaPredicted RBP16.18■□□□□ 0.18
PAAF1-201ENST00000310571 KRT85P78386 507 aa16.18■□□□□ 0.18
PAAF1-201ENST00000310571 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
PAAF1-201ENST00000310571 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
PAAF1-201ENST00000310571 XBP1P17861 261 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 GCKRQ14397 625 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 SNX21Q969T3 373 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 CDC5LQ99459 802 aaKnown RBP16.17■□□□□ 0.18
PAAF1-201ENST00000310571 CCDC69A6NI79 296 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.18
PAAF1-201ENST00000310571 LRRC7Q96NW7 1537 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 FERMT3Q86UX7 667 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 USP26Q9BXU7 913 aa16.17■□□□□ 0.18
PAAF1-201ENST00000310571 NIP7Q9Y221 180 aaKnown RBP eCLIP16.17■□□□□ 0.18
PAAF1-201ENST00000310571 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 ATP2B1P20020 1258 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
PAAF1-201ENST00000310571 ANAPC15P60006 121 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 SDF4Q9BRK5 362 aa16.16■□□□□ 0.18
PAAF1-201ENST00000310571 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 NMIQ13287 307 aaPredicted RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 BEND3Q5T5X7 828 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 AK7Q96M32 723 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 NAPBQ9H115 298 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 IRS4O14654 1257 aaPredicted RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 CPS1P31327 1500 aa16.15■□□□□ 0.18
PAAF1-201ENST00000310571 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
PAAF1-201ENST00000310571 ZNF213O14771 459 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 STK38Q15208 465 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 BRINP3Q76B58 766 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 BRMS1Q9HCU9 246 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 TTF1Q15361 905 aaPredicted RBP16.14■□□□□ 0.17
PAAF1-201ENST00000310571 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
PAAF1-201ENST00000310571 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
PAAF1-201ENST00000310571 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 RFC4P35249 363 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
PAAF1-201ENST00000310571 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
PAAF1-201ENST00000310571 MINDY4BA8MYZ0 360 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
PAAF1-201ENST00000310571 HAND2P61296 217 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 NEK1Q96PY6 1258 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
PAAF1-201ENST00000310571 KDRP35968 1356 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 SETD1BQ9UPS6 1966 aaKnown RBP16.12■□□□□ 0.17
PAAF1-201ENST00000310571 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
PAAF1-201ENST00000310571 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
PAAF1-201ENST00000310571 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 TECPR2O15040 1411 aa16.12■□□□□ 0.17
PAAF1-201ENST00000310571 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
PAAF1-201ENST00000310571 TPD52L1Q16890 204 aaPredicted RBP16.12■□□□□ 0.17
PAAF1-201ENST00000310571 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
PAAF1-201ENST00000310571 UQCRFS1P1P0C7P4 283 aa16.11■□□□□ 0.17
PAAF1-201ENST00000310571 GSPT1P15170 499 aaKnown RBP16.11■□□□□ 0.17
PAAF1-201ENST00000310571 CDKL5O76039 1030 aa16.11■□□□□ 0.17
PAAF1-201ENST00000310571 TIMM10P62072 90 aa16.11■□□□□ 0.17
PAAF1-201ENST00000310571 ME1P48163 572 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 HELBQ8NG08 1087 aaPredicted RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 SETDB2Q96T68 719 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 GRPEL1Q9HAV7 217 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 EYA2O00167 538 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 SF3B2Q13435 895 aaKnown RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 RPGRQ92834 1020 aaKnown RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 GJB2P29033 226 aa16.1■□□□□ 0.17
PAAF1-201ENST00000310571 CCT2P78371 535 aaKnown RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 ZNF594Q96JF6 807 aaPredicted RBP16.1■□□□□ 0.17
PAAF1-201ENST00000310571 AOX1Q06278 1338 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms