RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LMOD3Q0VAK6 560 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 NALCNQ8IZF0 1738 aa21.34■■□□□ 1.01
SPSB4-201ENST00000310546 SLC4A2P04920 1241 aa21.33■■□□□ 1.01
SPSB4-201ENST00000310546 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1.01
SPSB4-201ENST00000310546 TTC6Q86TZ1 520 aa21.33■■□□□ 1.01
SPSB4-201ENST00000310546 FAM53CQ9NYF3 392 aa21.33■■□□□ 1.01
SPSB4-201ENST00000310546 GOLGA6L4A6NEF3 574 aa21.33■■□□□ 1
SPSB4-201ENST00000310546 SNX14Q9Y5W7 946 aa21.33■■□□□ 1
SPSB4-201ENST00000310546 PEAK1Q9H792 1746 aa21.33■■□□□ 1
SPSB4-201ENST00000310546 CYP2C19P33261 490 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 ZNF165P49910 485 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 RASEFQ8IZ41 740 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 ERO1AQ96HE7 468 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 DNAJC25Q9H1X3 360 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 TTC14Q96N46 770 aa21.32■■□□□ 1
SPSB4-201ENST00000310546 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
SPSB4-201ENST00000310546 LRRC8AQ8IWT6 810 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 USP31Q70CQ4 1352 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 TTC21AQ8NDW8 1320 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 SKILP12757 684 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
SPSB4-201ENST00000310546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.31■■□□□ 1
SPSB4-201ENST00000310546 KIF1BPQ96EK5 621 aa21.31■■□□□ 1
SPSB4-201ENST00000310546 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
SPSB4-201ENST00000310546 FEZ2Q9UHY8 353 aaPredicted RBP21.3■■□□□ 1
SPSB4-201ENST00000310546 CCDC171Q6TFL3 1326 aa21.3■■□□□ 1
SPSB4-201ENST00000310546 TNNT3P45378 269 aaPredicted RBP21.3■■□□□ 1
SPSB4-201ENST00000310546 KRT85P78386 507 aa21.3■■□□□ 1
SPSB4-201ENST00000310546 BMS1Q14692 1282 aaKnown RBP21.3■■□□□ 1
SPSB4-201ENST00000310546 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
SPSB4-201ENST00000310546 SLU7O95391 586 aaKnown RBP21.29■■□□□ 1
SPSB4-201ENST00000310546 ERCC6LQ2NKX8 1250 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 KLHL34Q8N239 644 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 IL1RAPL2Q9NP60 686 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 FMN2Q9NZ56 1722 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 FILIP1Q7Z7B0 1213 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 PIK3C2AO00443 1686 aa21.29■■□□□ 1
SPSB4-201ENST00000310546 IL17RAQ96F46 866 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 EYA1Q99502 592 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.28■■□□□ 1
SPSB4-201ENST00000310546 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 GNAI2P04899 355 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 ZC3H6P61129 1189 aaKnown RBP21.28■■□□□ 1
SPSB4-201ENST00000310546 PTPRCP08575 1304 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 NYAP1Q6ZVC0 841 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 ZBTB9Q96C00 473 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 ZFP91Q96JP5 570 aaPredicted RBP21.28■■□□□ 1
SPSB4-201ENST00000310546 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 TFIP11Q9UBB9 837 aaKnown RBP21.28■■□□□ 1
SPSB4-201ENST00000310546 ANKARQ7Z5J8 1434 aa21.28■■□□□ 1
SPSB4-201ENST00000310546 POLR3GO15318 223 aaPredicted RBP21.27■■□□□ 1
SPSB4-201ENST00000310546 IRX3P78415 501 aaPredicted RBP21.27■■□□□ 1
SPSB4-201ENST00000310546 TDRD7Q8NHU6 1098 aaKnown RBP21.27■■□□□ 1
SPSB4-201ENST00000310546 DDX54Q8TDD1 881 aaKnown RBP21.27■■□□□ 1
SPSB4-201ENST00000310546 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
SPSB4-201ENST00000310546 NECAB1Q8N987 351 aa21.27■■□□□ 1
SPSB4-201ENST00000310546 NEK11Q8NG66 645 aa21.27■■□□□ 1
SPSB4-201ENST00000310546 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
SPSB4-201ENST00000310546 SPG7Q9UQ90 795 aa21.27■■□□□ 1
SPSB4-201ENST00000310546 KIAA0232Q92628 1395 aa21.26■□□□□ 0.99
SPSB4-201ENST00000310546 HAP1P54257 671 aaPredicted RBP21.26■□□□□ 0.99
SPSB4-201ENST00000310546 SLFNL1Q499Z3 407 aa21.26■□□□□ 0.99
SPSB4-201ENST00000310546 USP16Q9Y5T5 823 aa21.26■□□□□ 0.99
SPSB4-201ENST00000310546 LARP1BQ659C4 914 aaKnown RBP21.26■□□□□ 0.99
SPSB4-201ENST00000310546 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
SPSB4-201ENST00000310546 GOLGA6L19H0YKK7 550 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 HTATSF1O43719 755 aaKnown RBP21.25■□□□□ 0.99
SPSB4-201ENST00000310546 G2E3Q7L622 706 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 HYPKQ9NX55 129 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 ERBB3P21860 1342 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 FAM193AP78312 1265 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 FHOD1Q9Y613 1164 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 ATF3P18847 181 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 CREBRFQ8IUR6 639 aa21.25■□□□□ 0.99
SPSB4-201ENST00000310546 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.25■□□□□ 0.99
SPSB4-201ENST00000310546 CWC27Q6UX04 472 aaKnown RBP21.24■□□□□ 0.99
SPSB4-201ENST00000310546 CDC37L1Q7L3B6 337 aa21.24■□□□□ 0.99
SPSB4-201ENST00000310546 CLCN6P51797 869 aa21.24■□□□□ 0.99
SPSB4-201ENST00000310546 NECTIN2Q92692 538 aa21.24■□□□□ 0.99
SPSB4-201ENST00000310546 CCDC69A6NI79 296 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 NR1I2O75469 434 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 TMEM94Q12767 1356 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 SGSM2O43147 1006 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 LRRN4CLQ8ND94 238 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 BICD2Q8TD16 824 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 SPATA32Q96LK8 384 aa21.23■□□□□ 0.99
SPSB4-201ENST00000310546 HOXC9P31274 260 aa21.22■□□□□ 0.99
SPSB4-201ENST00000310546 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
SPSB4-201ENST00000310546 C19orf44Q9H6X5 657 aa21.22■□□□□ 0.99
SPSB4-201ENST00000310546 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
SPSB4-201ENST00000310546 STAP2Q9UGK3 403 aa21.22■□□□□ 0.99
SPSB4-201ENST00000310546 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
SPSB4-201ENST00000310546 CCAR2Q8N163 923 aaKnown RBP21.22■□□□□ 0.99
SPSB4-201ENST00000310546 JAKMIP1Q96N16 626 aaKnown RBP21.22■□□□□ 0.99
SPSB4-201ENST00000310546 H2AFXP16104 143 aaPredicted RBP21.21■□□□□ 0.99
SPSB4-201ENST00000310546 CCT4P50991 539 aaKnown RBP21.21■□□□□ 0.99
SPSB4-201ENST00000310546 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms