RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
PGAP3-202ENST00000309862 SIL1Q9H173 461 aa18.35■□□□□ 0.53
PGAP3-202ENST00000309862 TPM3P06753 285 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 EIF4A1P60842 406 aaKnown RBP18.34■□□□□ 0.53
PGAP3-202ENST00000309862 DNAJC25Q9H1X3 360 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 BOLA2Q9H3K6 86 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 SLC27A2O14975 620 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
PGAP3-202ENST00000309862 TM6SF1Q9BZW5 370 aa18.34■□□□□ 0.53
PGAP3-202ENST00000309862 NR1I2O75469 434 aa18.33■□□□□ 0.53
PGAP3-202ENST00000309862 BICD2Q8TD16 824 aa18.33■□□□□ 0.53
PGAP3-202ENST00000309862 ZNF592Q92610 1267 aa18.33■□□□□ 0.53
PGAP3-202ENST00000309862 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.53
PGAP3-202ENST00000309862 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.53
PGAP3-202ENST00000309862 A0A0D9SFI3 127 aa18.33■□□□□ 0.52
PGAP3-202ENST00000309862 FOSBP53539 338 aa18.33■□□□□ 0.52
PGAP3-202ENST00000309862 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
PGAP3-202ENST00000309862 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
PGAP3-202ENST00000309862 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
PGAP3-202ENST00000309862 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
PGAP3-202ENST00000309862 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 JAK2O60674 1132 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 TNNT1P13805 278 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 LEO1Q8WVC0 666 aaPredicted RBP18.32■□□□□ 0.52
PGAP3-202ENST00000309862 ANKRD7Q92527 254 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
PGAP3-202ENST00000309862 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
PGAP3-202ENST00000309862 A0A087WWV3 80 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 ZNF165P49910 485 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
PGAP3-202ENST00000309862 ZSCAN25Q6NSZ9 544 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 KLHDC4Q8TBB5 520 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 ZNF75DP51815 510 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 UTP14CQ5TAP6 766 aaKnown RBP18.31■□□□□ 0.52
PGAP3-202ENST00000309862 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
PGAP3-202ENST00000309862 PXDNLA1KZ92 1463 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 ADCY9O60503 1353 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 ARID5BQ14865 1188 aa18.31■□□□□ 0.52
PGAP3-202ENST00000309862 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 CTIFO43310 598 aaKnown RBP18.3■□□□□ 0.52
PGAP3-202ENST00000309862 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 CACTINQ8WUQ7 758 aaKnown RBP18.3■□□□□ 0.52
PGAP3-202ENST00000309862 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
PGAP3-202ENST00000309862 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 PDCP20941 246 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
PGAP3-202ENST00000309862 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
PGAP3-202ENST00000309862 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
PGAP3-202ENST00000309862 ZNF589Q86UQ0 364 aaPredicted RBP18.29■□□□□ 0.52
PGAP3-202ENST00000309862 KCNB2Q92953 911 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 SASH1O94885 1247 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 CHGBP05060 677 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 PSMA5P28066 241 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 TEFQ10587 303 aa18.29■□□□□ 0.52
PGAP3-202ENST00000309862 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
PGAP3-202ENST00000309862 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
PGAP3-202ENST00000309862 FBXW7Q969H0 707 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 TNRQ92752 1358 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 FMN2Q9NZ56 1722 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 CLSTN2Q9H4D0 955 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 ELP1O95163 1332 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
PGAP3-202ENST00000309862 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
PGAP3-202ENST00000309862 NPHP3Q7Z494 1330 aa18.27■□□□□ 0.52
PGAP3-202ENST00000309862 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
PGAP3-202ENST00000309862 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
PGAP3-202ENST00000309862 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.51
PGAP3-202ENST00000309862 G3BP1Q13283 466 aaKnown RBP eCLIP18.27■□□□□ 0.51
PGAP3-202ENST00000309862 SUCLG2Q96I99 432 aa18.27■□□□□ 0.51
PGAP3-202ENST00000309862 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.51
PGAP3-202ENST00000309862 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.51
PGAP3-202ENST00000309862 FTOQ9C0B1 505 aaKnown RBP eCLIP18.26■□□□□ 0.51
PGAP3-202ENST00000309862 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
PGAP3-202ENST00000309862 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
PGAP3-202ENST00000309862 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
PGAP3-202ENST00000309862 BRF1Q92994 677 aa18.26■□□□□ 0.51
PGAP3-202ENST00000309862 GTPBP4Q9BZE4 634 aaKnown RBP18.26■□□□□ 0.51
PGAP3-202ENST00000309862 USP27XA6NNY8 438 aa18.25■□□□□ 0.51
PGAP3-202ENST00000309862 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
PGAP3-202ENST00000309862 LRRC59Q96AG4 307 aaKnown RBP18.25■□□□□ 0.51
PGAP3-202ENST00000309862 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
PGAP3-202ENST00000309862 HSP90B1P14625 803 aaKnown RBP18.25■□□□□ 0.51
PGAP3-202ENST00000309862 RNF20Q5VTR2 975 aa18.25■□□□□ 0.51
PGAP3-202ENST00000309862 CCDC112Q8NEF3 446 aa18.25■□□□□ 0.51
PGAP3-202ENST00000309862 CCDC9Q9Y3X0 531 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms