RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 EXOC5O00471 708 aa29.26■■■□□ 2.27
RFWD2-201ENST00000308769 NEK4P51957 841 aa29.25■■■□□ 2.27
RFWD2-201ENST00000308769 ANAPC15P60006 121 aa29.25■■■□□ 2.27
RFWD2-201ENST00000308769 CCDC191Q8NCU4 936 aa29.24■■■□□ 2.27
RFWD2-201ENST00000308769 RAB3GAP1Q15042 981 aa29.24■■■□□ 2.27
RFWD2-201ENST00000308769 DIAPH3Q9NSV4 1193 aa29.24■■■□□ 2.27
RFWD2-201ENST00000308769 CHMP3Q9Y3E7 222 aa29.24■■■□□ 2.27
RFWD2-201ENST00000308769 RAD50Q92878 1312 aa29.24■■■□□ 2.27
RFWD2-201ENST00000308769 EVI5LQ96CN4 794 aa29.23■■■□□ 2.27
RFWD2-201ENST00000308769 TEX13AQ9BXU3 409 aaPredicted RBP29.23■■■□□ 2.27
RFWD2-201ENST00000308769 EPB41L2O43491 1005 aaKnown RBP29.23■■■□□ 2.27
RFWD2-201ENST00000308769 HSPA4P34932 840 aa29.23■■■□□ 2.27
RFWD2-201ENST00000308769 TFCP2Q12800 502 aa29.23■■■□□ 2.27
RFWD2-201ENST00000308769 TNPO1Q92973 898 aaKnown RBP29.23■■■□□ 2.27
RFWD2-201ENST00000308769 SYTL4Q96C24 671 aaPredicted RBP29.23■■■□□ 2.27
RFWD2-201ENST00000308769 LSG1Q9H089 658 aaKnown RBP29.22■■■□□ 2.27
RFWD2-201ENST00000308769 IL17RAQ96F46 866 aa29.21■■■□□ 2.27
RFWD2-201ENST00000308769 SLC4A9Q96Q91 983 aa29.21■■■□□ 2.27
RFWD2-201ENST00000308769 BOLA2Q9H3K6 86 aa29.21■■■□□ 2.27
RFWD2-201ENST00000308769 STARD3NLO95772 234 aa29.2■■■□□ 2.27
RFWD2-201ENST00000308769 TNNI3KQ59H18 835 aa29.2■■■□□ 2.27
RFWD2-201ENST00000308769 FPGT-TNNI3KV9GXZ4 949 aa29.2■■■□□ 2.27
RFWD2-201ENST00000308769 ISCA1Q9BUE6 129 aa29.19■■■□□ 2.26
RFWD2-201ENST00000308769 DBNLQ9UJU6 430 aaKnown RBP29.19■■■□□ 2.26
RFWD2-201ENST00000308769 TCIRG1Q13488 830 aa29.18■■■□□ 2.26
RFWD2-201ENST00000308769 SPATA31A1Q5TZJ5 1347 aa29.18■■■□□ 2.26
RFWD2-201ENST00000308769 KIF6Q6ZMV9 814 aa29.17■■■□□ 2.26
RFWD2-201ENST00000308769 KIAA1211Q6ZU35 1233 aa29.17■■■□□ 2.26
RFWD2-201ENST00000308769 RUFY2Q8WXA3 655 aa29.17■■■□□ 2.26
RFWD2-201ENST00000308769 UPF3BQ9BZI7 483 aaKnown RBP29.17■■■□□ 2.26
RFWD2-201ENST00000308769 NUTM2BA6NNL0 878 aaPredicted RBP29.16■■■□□ 2.26
RFWD2-201ENST00000308769 NUTM2EB1AL46 878 aaPredicted RBP29.16■■■□□ 2.26
RFWD2-201ENST00000308769 NUTM2AQ8IVF1 878 aaPredicted RBP29.16■■■□□ 2.26
RFWD2-201ENST00000308769 ZGPATQ8N5A5 531 aaKnown RBP29.16■■■□□ 2.26
RFWD2-201ENST00000308769 ARXQ96QS3 562 aa29.16■■■□□ 2.26
RFWD2-201ENST00000308769 PRIM1P49642 420 aaKnown RBP29.15■■■□□ 2.26
RFWD2-201ENST00000308769 SSFA2P28290 1259 aa29.15■■■□□ 2.26
RFWD2-201ENST00000308769 PIP4K2BP78356 416 aa29.15■■■□□ 2.26
RFWD2-201ENST00000308769 CYP19A1P11511 503 aaPredicted RBP29.14■■■□□ 2.26
RFWD2-201ENST00000308769 TMX3Q96JJ7 454 aa29.14■■■□□ 2.25
RFWD2-201ENST00000308769 FAM227BQ96M60 508 aa29.14■■■□□ 2.25
RFWD2-201ENST00000308769 ANKRD36CQ5JPF3 1778 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 PTH1RQ03431 593 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 ATG9AQ7Z3C6 839 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 DBNDD2Q9BQY9 259 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 FSD1Q9BTV5 496 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 SNX14Q9Y5W7 946 aa29.13■■■□□ 2.25
RFWD2-201ENST00000308769 NOL8Q76FK4 1167 aaKnown RBP29.12■■■□□ 2.25
RFWD2-201ENST00000308769 MAP3K15Q6ZN16 1313 aa29.12■■■□□ 2.25
RFWD2-201ENST00000308769 MCM2P49736 904 aa29.12■■■□□ 2.25
RFWD2-201ENST00000308769 NMIQ13287 307 aaPredicted RBP29.12■■■□□ 2.25
RFWD2-201ENST00000308769 DDB1Q16531 1140 aa29.12■■■□□ 2.25
RFWD2-201ENST00000308769 RASEFQ8IZ41 740 aa29.12■■■□□ 2.25
RFWD2-201ENST00000308769 EDC3Q96F86 508 aaKnown RBP29.12■■■□□ 2.25
RFWD2-201ENST00000308769 ZNF594Q96JF6 807 aaPredicted RBP29.12■■■□□ 2.25
RFWD2-201ENST00000308769 ZBTB1Q9Y2K1 713 aa29.12■■■□□ 2.25
RFWD2-201ENST00000308769 NWD2Q9ULI1 1742 aa29.11■■■□□ 2.25
RFWD2-201ENST00000308769 CDCA7Q9BWT1 371 aaPredicted RBP29.11■■■□□ 2.25
RFWD2-201ENST00000308769 THRAP3Q9Y2W1 955 aaKnown RBP29.11■■■□□ 2.25
RFWD2-201ENST00000308769 NUP98P52948 1817 aa29.11■■■□□ 2.25
RFWD2-201ENST00000308769 DDX11L8A8MPP1 907 aa29.11■■■□□ 2.25
RFWD2-201ENST00000308769 ATP5JP18859 108 aa29.11■■■□□ 2.25
RFWD2-201ENST00000308769 HIP1O00291 1037 aa29.1■■■□□ 2.25
RFWD2-201ENST00000308769 TRIM28Q13263 835 aaKnown RBP29.1■■■□□ 2.25
RFWD2-201ENST00000308769 HLFQ16534 295 aa29.1■■■□□ 2.25
RFWD2-201ENST00000308769 GBP4Q96PP9 640 aa29.1■■■□□ 2.25
RFWD2-201ENST00000308769 GIGYF2Q6Y7W6 1299 aaKnown RBP29.09■■■□□ 2.25
RFWD2-201ENST00000308769 FAM89AQ96GI7 184 aa29.09■■■□□ 2.25
RFWD2-201ENST00000308769 NDUFB9Q9Y6M9 179 aa29.09■■■□□ 2.25
RFWD2-201ENST00000308769 PKP1Q13835 747 aa29.09■■■□□ 2.25
RFWD2-201ENST00000308769 LRRC24Q50LG9 513 aa29.09■■■□□ 2.25
RFWD2-201ENST00000308769 CWC22Q9HCG8 908 aaKnown RBP29.09■■■□□ 2.25
RFWD2-201ENST00000308769 A0A0D9SFI3 127 aa29.08■■■□□ 2.25
RFWD2-201ENST00000308769 A0A0G2JS52 829 aa29.08■■■□□ 2.25
RFWD2-201ENST00000308769 PCCAP05165 728 aaPredicted RBP29.07■■■□□ 2.24
RFWD2-201ENST00000308769 SPATA31A5Q5VU36 1347 aa29.07■■■□□ 2.24
RFWD2-201ENST00000308769 CCDC171Q6TFL3 1326 aa29.07■■■□□ 2.24
RFWD2-201ENST00000308769 SPATA31A7Q8IWB4 1347 aa29.07■■■□□ 2.24
RFWD2-201ENST00000308769 CCDC9Q9Y3X0 531 aaKnown RBP29.07■■■□□ 2.24
RFWD2-201ENST00000308769 GPTP24298 496 aa29.06■■■□□ 2.24
RFWD2-201ENST00000308769 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
RFWD2-201ENST00000308769 EYA2O00167 538 aa29.06■■■□□ 2.24
RFWD2-201ENST00000308769 TRAK2O60296 914 aa29.06■■■□□ 2.24
RFWD2-201ENST00000308769 IL15P40933 162 aaPredicted RBP29.06■■■□□ 2.24
RFWD2-201ENST00000308769 SLIT2O94813 1529 aa29.06■■■□□ 2.24
RFWD2-201ENST00000308769 TOM1O60784 492 aa29.05■■■□□ 2.24
RFWD2-201ENST00000308769 CYP2E1P05181 493 aaPredicted RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 NUCB2P80303 420 aa29.05■■■□□ 2.24
RFWD2-201ENST00000308769 MARCH10Q8NA82 808 aaPredicted RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 ZBTB38Q8NAP3 1195 aaPredicted RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 PUS3Q9BZE2 481 aaKnown RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 MYH3P11055 1940 aa29.05■■■□□ 2.24
RFWD2-201ENST00000308769 PRPF40BQ6NWY9 871 aaKnown RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 CCDC85AQ96PX6 553 aaPredicted RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 DNAJC2Q99543 621 aaKnown RBP29.05■■■□□ 2.24
RFWD2-201ENST00000308769 CUL4AQ13619 759 aa29.04■■■□□ 2.24
RFWD2-201ENST00000308769 SYNE4Q8N205 404 aa29.04■■■□□ 2.24
RFWD2-201ENST00000308769 NEUROD6Q96NK8 337 aa29.04■■■□□ 2.24
RFWD2-201ENST00000308769 ZNF609O15014 1411 aa29.04■■■□□ 2.24
RFWD2-201ENST00000308769 TIMM10P62072 90 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms