RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 KCNA6P17658 529 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 CDC5LQ99459 802 aaKnown RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 ABCC1P33527 1531 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 CRACR2BQ8N4Y2 399 aaPredicted RBP11.5□□□□□ -0.57
TMOD3-201ENST00000308580 PHAXQ9H814 394 aaKnown RBP11.5□□□□□ -0.57
TMOD3-201ENST00000308580 TEX14Q8IWB6 1497 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 UBXN4Q92575 508 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 ZBTB7BO15156 539 aaPredicted RBP11.5□□□□□ -0.57
TMOD3-201ENST00000308580 ADCY5O95622 1261 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 CCDC194A0A1B0GVG4 234 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 GCP02774 474 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 METAP2P50579 478 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMOD3-201ENST00000308580 NLRP5P59047 1200 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 G2E3Q7L622 706 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 KLF18A0A0U1RQI7 1052 aa11.5□□□□□ -0.57
TMOD3-201ENST00000308580 TOP1P11387 765 aaKnown RBP11.5□□□□□ -0.57
TMOD3-201ENST00000308580 NPC1L1Q9UHC9 1359 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 MFSD6Q6ZSS7 791 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 MYO6Q9UM54 1294 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
TMOD3-201ENST00000308580 ERLIN1O75477 346 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 MCM5P33992 734 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 IL15P40933 162 aaPredicted RBP11.49□□□□□ -0.57
TMOD3-201ENST00000308580 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
TMOD3-201ENST00000308580 HOXC9P31274 260 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 SLC26A6Q9BXS9 759 aa11.49□□□□□ -0.57
TMOD3-201ENST00000308580 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 IQSEC3Q9UPP2 1182 aaPredicted RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 KIAA1328Q86T90 577 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 RPGRQ92834 1020 aaKnown RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 IL13P35225 146 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 TRMT1Q9NXH9 659 aaKnown RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 SOS1Q07889 1333 aaPredicted RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 ADGRL2O95490 1459 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 ZFYP08048 801 aaPredicted RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
TMOD3-201ENST00000308580 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
TMOD3-201ENST00000308580 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 STX1AQ16623 288 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 PDCL2Q8N4E4 241 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 MSH6P52701 1360 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 ZMYM3Q14202 1370 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 CCDC96Q2M329 555 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 ZSCAN16Q9H4T2 348 aaPredicted RBP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 LRSAM1Q6UWE0 723 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 KIF18AQ8NI77 898 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 OTUD7AQ8TE49 926 aaPredicted RBP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 CPLX3Q8WVH0 158 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 C16orf45Q96MC5 204 aaPredicted RBP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 ZSCAN12O43309 604 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 CWC15Q9P013 229 aaKnown RBP11.47□□□□□ -0.57
TMOD3-201ENST00000308580 CHMLP26374 656 aa11.47□□□□□ -0.57
TMOD3-201ENST00000308580 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
TMOD3-201ENST00000308580 ABCC2Q92887 1545 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 H0YHG0 523 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 Q6ZUG5 572 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 TBX22Q9Y458 520 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 CCDC66A2RUB6 948 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
TMOD3-201ENST00000308580 RDXP35241 583 aaKnown RBP11.46□□□□□ -0.58
TMOD3-201ENST00000308580 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 IP6K1Q92551 441 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 TNNT1P13805 278 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 DNM1Q05193 864 aaKnown RBP11.46□□□□□ -0.58
TMOD3-201ENST00000308580 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 LDHCP07864 332 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 TMC6Q7Z403 805 aa11.46□□□□□ -0.58
TMOD3-201ENST00000308580 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.58
TMOD3-201ENST00000308580 F13A1P00488 732 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 AK2P54819 239 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 ACSBG1Q96GR2 724 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 RNMTO43148 476 aaKnown RBP11.45□□□□□ -0.58
TMOD3-201ENST00000308580 ZBTB43O43298 467 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 PDE4BQ07343 736 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 VAT1LQ9HCJ6 419 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 PAG1Q9NWQ8 432 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms