RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CALD1Q05682 793 aaKnown RBP25.78■■□□□ 1.72
PDZRN3-202ENST00000308537 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
PDZRN3-202ENST00000308537 NLRP10Q86W26 655 aa25.78■■□□□ 1.72
PDZRN3-202ENST00000308537 WWC1Q8IX03 1113 aa25.78■■□□□ 1.72
PDZRN3-202ENST00000308537 DBF4Q9UBU7 674 aaPredicted RBP25.78■■□□□ 1.72
PDZRN3-202ENST00000308537 GTF2E1P29083 439 aaPredicted RBP25.77■■□□□ 1.72
PDZRN3-202ENST00000308537 TCIRG1Q13488 830 aa25.77■■□□□ 1.72
PDZRN3-202ENST00000308537 SLC10A5Q5PT55 438 aa25.77■■□□□ 1.72
PDZRN3-202ENST00000308537 SLC51AQ86UW1 340 aa25.76■■□□□ 1.71
PDZRN3-202ENST00000308537 TAOK3Q9H2K8 898 aa25.76■■□□□ 1.71
PDZRN3-202ENST00000308537 DDX60Q8IY21 1712 aaKnown RBP25.75■■□□□ 1.71
PDZRN3-202ENST00000308537 PPP1R42Q7Z4L9 355 aa25.75■■□□□ 1.71
PDZRN3-202ENST00000308537 SYNE4Q8N205 404 aa25.75■■□□□ 1.71
PDZRN3-202ENST00000308537 TSPYL6Q8N831 410 aa25.75■■□□□ 1.71
PDZRN3-202ENST00000308537 PLBD2Q8NHP8 589 aa25.75■■□□□ 1.71
PDZRN3-202ENST00000308537 ELL2O00472 640 aaPredicted RBP25.74■■□□□ 1.71
PDZRN3-202ENST00000308537 HSP90AB3PQ58FF7 597 aa25.74■■□□□ 1.71
PDZRN3-202ENST00000308537 SOGA3Q5TF21 947 aa25.74■■□□□ 1.71
PDZRN3-202ENST00000308537 ISCA1Q9BUE6 129 aa25.74■■□□□ 1.71
PDZRN3-202ENST00000308537 UTP14AQ9BVJ6 771 aaKnown RBP25.74■■□□□ 1.71
PDZRN3-202ENST00000308537 RNF123Q5XPI4 1314 aa25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 ALDH1B1P30837 517 aa25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 CCDC93Q567U6 631 aa25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 TSR2Q969E8 191 aaKnown RBP25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 HYPKQ9NX55 129 aa25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 WDR90Q96KV7 1748 aa25.73■■□□□ 1.71
PDZRN3-202ENST00000308537 KDM2BQ8NHM5 1336 aa25.72■■□□□ 1.71
PDZRN3-202ENST00000308537 GLTPD2A6NH11 291 aa25.72■■□□□ 1.71
PDZRN3-202ENST00000308537 ANKRD13DQ6ZTN6 518 aa25.72■■□□□ 1.71
PDZRN3-202ENST00000308537 PHAXQ9H814 394 aaKnown RBP25.72■■□□□ 1.71
PDZRN3-202ENST00000308537 TOMM70O94826 608 aa25.71■■□□□ 1.71
PDZRN3-202ENST00000308537 IL16Q14005 1332 aa25.7■■□□□ 1.71
PDZRN3-202ENST00000308537 POTECB2RU33 542 aa25.7■■□□□ 1.7
PDZRN3-202ENST00000308537 CRAMP1Q96RY5 1269 aa25.7■■□□□ 1.7
PDZRN3-202ENST00000308537 RRAGCQ9HB90 399 aa25.7■■□□□ 1.7
PDZRN3-202ENST00000308537 TAF1P21675 1872 aa25.7■■□□□ 1.7
PDZRN3-202ENST00000308537 COL4A5P29400 1685 aa25.69■■□□□ 1.7
PDZRN3-202ENST00000308537 FKBP4Q02790 459 aaKnown RBP eCLIP25.69■■□□□ 1.7
PDZRN3-202ENST00000308537 COL4A1P02462 1669 aa25.68■■□□□ 1.7
PDZRN3-202ENST00000308537 HCLS1P14317 486 aaPredicted RBP25.67■■□□□ 1.7
PDZRN3-202ENST00000308537 TRIM28Q13263 835 aaKnown RBP25.67■■□□□ 1.7
PDZRN3-202ENST00000308537 RPGRQ92834 1020 aaKnown RBP25.67■■□□□ 1.7
PDZRN3-202ENST00000308537 ZNF428Q96B54 188 aa25.67■■□□□ 1.7
PDZRN3-202ENST00000308537 ATP5J2-PTCD1G3V325 749 aa25.66■■□□□ 1.7
PDZRN3-202ENST00000308537 HSPA6P17066 643 aa25.66■■□□□ 1.7
PDZRN3-202ENST00000308537 NLRP3Q96P20 1036 aa25.66■■□□□ 1.7
PDZRN3-202ENST00000308537 TRMT112Q9UI30 125 aaKnown RBP25.66■■□□□ 1.7
PDZRN3-202ENST00000308537 SH3TC1Q8TE82 1336 aa25.65■■□□□ 1.7
PDZRN3-202ENST00000308537 RTKN2Q8IZC4 609 aa25.65■■□□□ 1.7
PDZRN3-202ENST00000308537 RBM46Q8TBY0 533 aaKnown RBP25.65■■□□□ 1.7
PDZRN3-202ENST00000308537 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
PDZRN3-202ENST00000308537 ABCC4O15439 1325 aa25.64■■□□□ 1.7
PDZRN3-202ENST00000308537 RBM17Q96I25 401 aaKnown RBP25.64■■□□□ 1.7
PDZRN3-202ENST00000308537 PSMD1Q99460 953 aa25.64■■□□□ 1.7
PDZRN3-202ENST00000308537 SPINK5Q9NQ38 1064 aaPredicted RBP25.64■■□□□ 1.7
PDZRN3-202ENST00000308537 FANCIQ9NVI1 1328 aa25.63■■□□□ 1.69
PDZRN3-202ENST00000308537 CCDC30Q5VVM6 783 aa25.62■■□□□ 1.69
PDZRN3-202ENST00000308537 CC2D2BQ6DHV5 1058 aa25.62■■□□□ 1.69
PDZRN3-202ENST00000308537 LRRC37AA6NMS7 1700 aa25.62■■□□□ 1.69
PDZRN3-202ENST00000308537 PPEF1O14829 653 aaPredicted RBP25.61■■□□□ 1.69
PDZRN3-202ENST00000308537 WDR63Q8IWG1 891 aa25.61■■□□□ 1.69
PDZRN3-202ENST00000308537 FAM89AQ96GI7 184 aa25.61■■□□□ 1.69
PDZRN3-202ENST00000308537 DDNO94850 711 aaPredicted RBP25.6■■□□□ 1.69
PDZRN3-202ENST00000308537 IARSP41252 1262 aaKnown RBP25.6■■□□□ 1.69
PDZRN3-202ENST00000308537 TWISTNBQ3B726 338 aaPredicted RBP25.6■■□□□ 1.69
PDZRN3-202ENST00000308537 CACNA1FO60840 1977 aa25.6■■□□□ 1.69
PDZRN3-202ENST00000308537 ZNF541Q9H0D2 1346 aa25.6■■□□□ 1.69
PDZRN3-202ENST00000308537 VEGFAP15692 232 aaPredicted RBP25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 GOLGA2Q08379 1002 aa25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 RIC3Q7Z5B4 369 aa25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 FAM9BQ8IZU0 186 aa25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 SALL2Q9Y467 1007 aaPredicted RBP25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 ATP6V0A2Q9Y487 856 aa25.59■■□□□ 1.69
PDZRN3-202ENST00000308537 DUOX1Q9NRD9 1551 aa25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 FZD9O00144 591 aa25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 SF3B3Q15393 1217 aaKnown RBP25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 DPY19L2Q6NUT2 758 aa25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 G2E3Q7L622 706 aa25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 ZNF521Q96K83 1311 aa25.58■■□□□ 1.69
PDZRN3-202ENST00000308537 SCN4AP35499 1836 aa25.58■■□□□ 1.68
PDZRN3-202ENST00000308537 TCERG1O14776 1098 aaKnown RBP25.57■■□□□ 1.68
PDZRN3-202ENST00000308537 METTL22Q9BUU2 404 aaPredicted RBP25.57■■□□□ 1.68
PDZRN3-202ENST00000308537 FSTL1Q12841 308 aa25.56■■□□□ 1.68
PDZRN3-202ENST00000308537 L3MBTL3Q96JM7 780 aaPredicted RBP25.56■■□□□ 1.68
PDZRN3-202ENST00000308537 MYD88Q99836 296 aa25.56■■□□□ 1.68
PDZRN3-202ENST00000308537 LTBP1Q14766 1721 aa25.55■■□□□ 1.68
PDZRN3-202ENST00000308537 VAMP4O75379 141 aa25.55■■□□□ 1.68
PDZRN3-202ENST00000308537 GRAPQ13588 217 aa25.55■■□□□ 1.68
PDZRN3-202ENST00000308537 GRIPAP1Q4V328 841 aa25.55■■□□□ 1.68
PDZRN3-202ENST00000308537 GRAPLQ8TC17 118 aaPredicted RBP25.55■■□□□ 1.68
PDZRN3-202ENST00000308537 BBOX1O75936 387 aa25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 IGKV5-2P06315 115 aa25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 RTL5Q5HYW3 569 aaPredicted RBP25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 SP8Q8IXZ3 490 aa25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 C16orf71Q8IYS4 520 aaPredicted RBP25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 ZBTB38Q8NAP3 1195 aaPredicted RBP25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 CCDC191Q8NCU4 936 aa25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 RTFDC1Q9BY42 306 aaPredicted RBP25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 CHMP4AQ9BY43 222 aa25.54■■□□□ 1.68
PDZRN3-202ENST00000308537 MAP3K2Q9Y2U5 619 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms