RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
CHRNA7-201ENST00000306901 KRT13P13646 458 aa16.38■□□□□ 0.21
CHRNA7-201ENST00000306901 NAP1L3Q99457 506 aaPredicted RBP16.38■□□□□ 0.21
CHRNA7-201ENST00000306901 RABEP2Q9H5N1 569 aa16.38■□□□□ 0.21
CHRNA7-201ENST00000306901 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
CHRNA7-201ENST00000306901 SYT1P21579 422 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 AKR1B10O60218 316 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 SYT10Q6XYQ8 523 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 KIF21BO75037 1637 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 ARID5AQ03989 594 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 TCEANC2Q96MN5 208 aa16.37■□□□□ 0.21
CHRNA7-201ENST00000306901 GOLGA1Q92805 767 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 CCDC114Q96M63 670 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 LZTFL1Q9NQ48 299 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 CCDC196A0A1B0GTZ2 297 aa16.36■□□□□ 0.21
CHRNA7-201ENST00000306901 GOLIM4O00461 696 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 SYKP43405 635 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 ZKSCAN5Q9Y2L8 839 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 CCDC63Q8NA47 563 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 OPA1O60313 960 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 PPP4R3AQ6IN85 833 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 TSNARE1Q96NA8 513 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 TMCO4Q5TGY1 634 aa16.35■□□□□ 0.21
CHRNA7-201ENST00000306901 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 ANKS4BQ8N8V4 417 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 TRIM27P14373 513 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 GBP6Q6ZN66 633 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 FAM114A1Q8IWE2 563 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 FCHSD2O94868 740 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 PSMC4P43686 418 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 CFAP57Q96MR6 1250 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 EXOC1Q9NV70 894 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
CHRNA7-201ENST00000306901 EBAG9O00559 213 aa16.33■□□□□ 0.21
CHRNA7-201ENST00000306901 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.21
CHRNA7-201ENST00000306901 ZBTB16Q05516 673 aa16.33■□□□□ 0.21
CHRNA7-201ENST00000306901 RAB34Q9BZG1 259 aa16.33■□□□□ 0.21
CHRNA7-201ENST00000306901 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.21
CHRNA7-201ENST00000306901 IQCGQ9H095 443 aaKnown RBP16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 EHBP1Q8NDI1 1231 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 NEK1Q96PY6 1258 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 DACT1Q9NYF0 836 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 ZNF569Q5MCW4 686 aa16.33■□□□□ 0.2
CHRNA7-201ENST00000306901 CPLX4Q7Z7G2 160 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 DZIP1Q86YF9 867 aaKnown RBP16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 TLDC2A0PJX2 215 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 ARHGAP5Q13017 1502 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 CUL5Q93034 780 aa16.32■□□□□ 0.2
CHRNA7-201ENST00000306901 AMPD3Q01432 767 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 SF3A3Q12874 501 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 GRIPAP1Q4V328 841 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
CHRNA7-201ENST00000306901 CAVIN4Q5BKX8 364 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms