RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 TNNI2P48788 182 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 CCDC112Q8NEF3 446 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 C22orf23Q9BZE7 217 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 MKNK2Q9HBH9 465 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 BLMP54132 1417 aaPredicted RBP9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 SMC2O95347 1197 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 PHAXQ9H814 394 aaKnown RBP9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 FRMPD1Q5SYB0 1578 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 LRRIQ1Q96JM4 1722 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 MYD88Q99836 296 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 ABCF2Q9UG63 623 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 MAST3O60307 1309 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 IQCEQ6IPM2 695 aa9.72□□□□□ -0.85
PCDHB1-201ENST00000306549 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 CABP5Q9NP86 173 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 ANAPC15P60006 121 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 CHRNA2Q15822 529 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 BLOC1S2Q6QNY1 142 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 CFAP45Q9UL16 551 aa9.71□□□□□ -0.85
PCDHB1-201ENST00000306549 INCENPQ9NQS7 918 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 CCDC91Q7Z6B0 441 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 TANGO6Q9C0B7 1094 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 ZC3H12CQ9C0D7 883 aaKnown RBP9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 STAMBPO95630 424 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 TTLL5Q6EMB2 1281 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 TMEM94Q12767 1356 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 ERBB4Q15303 1308 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 GNAT2P19087 354 aa9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
PCDHB1-201ENST00000306549 HMGN5P82970 282 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 TMTC2Q8N394 836 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 CUL5Q93034 780 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 PARD3Q8TEW0 1356 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 PDE4AP27815 886 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 ZNF622Q969S3 477 aaKnown RBP eCLIP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 PYM1Q9BRP8 204 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 IDH1O75874 414 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 CCDC150Q8NCX0 1101 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 TSPYL1Q9H0U9 437 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 MBD3O95983 291 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 JAKMIP3Q5VZ66 844 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 KSR2Q6VAB6 950 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 RBM17Q96I25 401 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 CRNKL1Q9BZJ0 848 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 ZMYM4Q5VZL5 1548 aa9.7□□□□□ -0.86
PCDHB1-201ENST00000306549 AXDND1Q5T1B0 1012 aaPredicted RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 PPFIBP1Q86W92 1011 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 SIL1Q9H173 461 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 MAP3K2Q9Y2U5 619 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 GRM8O00222 908 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 IL15P40933 162 aaPredicted RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 STK38Q15208 465 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 HMG20BQ9P0W2 317 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 PABPN1LA6NDY0 278 aaKnown RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 HOXC9P31274 260 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 CTCFLQ8NI51 663 aaPredicted RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 CCDC87Q9NVE4 849 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 LINS1Q8NG48 757 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 CARD10Q9BWT7 1032 aa9.69□□□□□ -0.86
PCDHB1-201ENST00000306549 ZNF710Q8N1W2 664 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 HOMER2Q9NSB8 354 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 CCNL1Q9UK58 526 aaPredicted RBP9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 IBSPP21815 317 aaPredicted RBP9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 SKIDA1Q1XH10 827 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 TMC4Q7Z404 712 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 SEPT11Q9NVA2 429 aaKnown RBP9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 GNAQP50148 359 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 UBE3BQ7Z3V4 1068 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 CNBD1Q8NA66 436 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 CNNM2Q9H8M5 875 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
PCDHB1-201ENST00000306549 RXRBP28702 533 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 RARSP54136 660 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms