RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
FANCA-201ENST00000305699 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
FANCA-201ENST00000305699 OLFM4Q6UX06 510 aa20.28■□□□□ 0.84
FANCA-201ENST00000305699 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
FANCA-201ENST00000305699 GNAI1P63096 354 aa20.27■□□□□ 0.84
FANCA-201ENST00000305699 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
FANCA-201ENST00000305699 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
FANCA-201ENST00000305699 ANKRD36CQ5JPF3 1778 aa20.27■□□□□ 0.84
FANCA-201ENST00000305699 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
FANCA-201ENST00000305699 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.83
FANCA-201ENST00000305699 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.83
FANCA-201ENST00000305699 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.83
FANCA-201ENST00000305699 ANP32CO43423 234 aa20.26■□□□□ 0.83
FANCA-201ENST00000305699 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
FANCA-201ENST00000305699 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
FANCA-201ENST00000305699 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
FANCA-201ENST00000305699 TCIRG1Q13488 830 aa20.25■□□□□ 0.83
FANCA-201ENST00000305699 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
FANCA-201ENST00000305699 ZNF277Q9NRM2 450 aaPredicted RBP20.25■□□□□ 0.83
FANCA-201ENST00000305699 HOXA10P31260 410 aaPredicted RBP20.24■□□□□ 0.83
FANCA-201ENST00000305699 APLP1P51693 650 aa20.24■□□□□ 0.83
FANCA-201ENST00000305699 FSTL1Q12841 308 aa20.24■□□□□ 0.83
FANCA-201ENST00000305699 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
FANCA-201ENST00000305699 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
FANCA-201ENST00000305699 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
FANCA-201ENST00000305699 ELL2O00472 640 aaPredicted RBP20.23■□□□□ 0.83
FANCA-201ENST00000305699 HYPKQ9NX55 129 aa20.23■□□□□ 0.83
FANCA-201ENST00000305699 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
FANCA-201ENST00000305699 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
FANCA-201ENST00000305699 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 CRAMP1Q96RY5 1269 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
FANCA-201ENST00000305699 PPEF1O14829 653 aaPredicted RBP20.21■□□□□ 0.83
FANCA-201ENST00000305699 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
FANCA-201ENST00000305699 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
FANCA-201ENST00000305699 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
FANCA-201ENST00000305699 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
FANCA-201ENST00000305699 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
FANCA-201ENST00000305699 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
FANCA-201ENST00000305699 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
FANCA-201ENST00000305699 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
FANCA-201ENST00000305699 POTECB2RU33 542 aa20.19■□□□□ 0.82
FANCA-201ENST00000305699 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
FANCA-201ENST00000305699 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
FANCA-201ENST00000305699 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
FANCA-201ENST00000305699 PSMD1Q99460 953 aa20.19■□□□□ 0.82
FANCA-201ENST00000305699 LAMB2P55268 1798 aa20.17■□□□□ 0.82
FANCA-201ENST00000305699 GRIPAP1Q4V328 841 aa20.17■□□□□ 0.82
FANCA-201ENST00000305699 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
FANCA-201ENST00000305699 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
FANCA-201ENST00000305699 ABCC4O15439 1325 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
FANCA-201ENST00000305699 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
FANCA-201ENST00000305699 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
FANCA-201ENST00000305699 SNED1Q8TER0 1413 aa20.16■□□□□ 0.82
FANCA-201ENST00000305699 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
FANCA-201ENST00000305699 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
FANCA-201ENST00000305699 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
FANCA-201ENST00000305699 IQCA1LA6NCM1 817 aa20.14■□□□□ 0.81
FANCA-201ENST00000305699 HTRA3P83110 453 aa20.14■□□□□ 0.81
FANCA-201ENST00000305699 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.81
FANCA-201ENST00000305699 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.81
FANCA-201ENST00000305699 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
FANCA-201ENST00000305699 BBOX1O75936 387 aa20.13■□□□□ 0.81
FANCA-201ENST00000305699 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
FANCA-201ENST00000305699 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
FANCA-201ENST00000305699 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
FANCA-201ENST00000305699 FZD9O00144 591 aa20.12■□□□□ 0.81
FANCA-201ENST00000305699 L3MBTL3Q96JM7 780 aaPredicted RBP20.12■□□□□ 0.81
FANCA-201ENST00000305699 DDX60Q8IY21 1712 aaKnown RBP20.12■□□□□ 0.81
FANCA-201ENST00000305699 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
FANCA-201ENST00000305699 EIF6P56537 245 aaKnown RBP20.11■□□□□ 0.81
FANCA-201ENST00000305699 GRAPQ13588 217 aa20.11■□□□□ 0.81
FANCA-201ENST00000305699 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
FANCA-201ENST00000305699 MYD88Q99836 296 aa20.11■□□□□ 0.81
FANCA-201ENST00000305699 SCN4AP35499 1836 aa20.11■□□□□ 0.81
FANCA-201ENST00000305699 PPIP5K2O43314 1243 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
FANCA-201ENST00000305699 SP8Q8IXZ3 490 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 COL4A5P29400 1685 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 TAF1P21675 1872 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
FANCA-201ENST00000305699 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 CHADLQ6NUI6 762 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
FANCA-201ENST00000305699 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
FANCA-201ENST00000305699 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
FANCA-201ENST00000305699 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms