RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.19
SCG2-201ENST00000305409 ERBB4Q15303 1308 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 USP42Q9H9J4 1324 aaKnown RBP13.83□□□□□ -0.2
SCG2-201ENST00000305409 TNS2Q63HR2 1409 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
SCG2-201ENST00000305409 SSFA2P28290 1259 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 PTH1RQ03431 593 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 PKP1Q13835 747 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
SCG2-201ENST00000305409 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
SCG2-201ENST00000305409 DTNBO60941 627 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
SCG2-201ENST00000305409 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 STARD3NLO95772 234 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 CPA1P15085 419 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 MCCP23508 829 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
SCG2-201ENST00000305409 TIMM10P62072 90 aa13.81□□□□□ -0.2
SCG2-201ENST00000305409 DDB1Q16531 1140 aa13.81□□□□□ -0.2
SCG2-201ENST00000305409 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
SCG2-201ENST00000305409 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
SCG2-201ENST00000305409 LSG1Q9H089 658 aaKnown RBP13.81□□□□□ -0.2
SCG2-201ENST00000305409 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
SCG2-201ENST00000305409 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
SCG2-201ENST00000305409 CCDC191Q8NCU4 936 aa13.81□□□□□ -0.2
SCG2-201ENST00000305409 DNAJC2Q99543 621 aaKnown RBP13.81□□□□□ -0.2
SCG2-201ENST00000305409 NMIQ13287 307 aaPredicted RBP13.8□□□□□ -0.2
SCG2-201ENST00000305409 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 FSD1Q9BTV5 496 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 ARFGEF2Q9Y6D5 1785 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 CYP19A1P11511 503 aaPredicted RBP13.8□□□□□ -0.2
SCG2-201ENST00000305409 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
SCG2-201ENST00000305409 EVI5LQ96CN4 794 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
SCG2-201ENST00000305409 HSPA4P34932 840 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 ATG9AQ7Z3C6 839 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 TMX3Q96JJ7 454 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
SCG2-201ENST00000305409 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
SCG2-201ENST00000305409 BCL9O00512 1426 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 KCNQ2O43526 872 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 KCNQ4P56696 695 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 ISCA1Q9BUE6 129 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 SNX14Q9Y5W7 946 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
SCG2-201ENST00000305409 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
SCG2-201ENST00000305409 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
SCG2-201ENST00000305409 RAD50Q92878 1312 aa13.78□□□□□ -0.2
SCG2-201ENST00000305409 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
SCG2-201ENST00000305409 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
SCG2-201ENST00000305409 UBR2Q8IWV8 1755 aa13.78□□□□□ -0.2
SCG2-201ENST00000305409 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
SCG2-201ENST00000305409 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
SCG2-201ENST00000305409 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
SCG2-201ENST00000305409 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
SCG2-201ENST00000305409 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
SCG2-201ENST00000305409 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
SCG2-201ENST00000305409 TOM1O60784 492 aa13.77□□□□□ -0.21
SCG2-201ENST00000305409 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
SCG2-201ENST00000305409 SMIM5Q71RC9 77 aa13.77□□□□□ -0.21
SCG2-201ENST00000305409 SEC62Q99442 399 aaKnown RBP13.77□□□□□ -0.21
SCG2-201ENST00000305409 MAP3K15Q6ZN16 1313 aa13.77□□□□□ -0.21
SCG2-201ENST00000305409 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
SCG2-201ENST00000305409 AK9Q5TCS8 1911 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 AHDC1Q5TGY3 1603 aaPredicted RBP13.76□□□□□ -0.21
SCG2-201ENST00000305409 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 KCNJ4P48050 445 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
SCG2-201ENST00000305409 TRAK2O60296 914 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 GIGYF2Q6Y7W6 1299 aaKnown RBP13.76□□□□□ -0.21
SCG2-201ENST00000305409 RUFY2Q8WXA3 655 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
SCG2-201ENST00000305409 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 EYA2O00167 538 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 ANAPC15P60006 121 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 PTF1AQ7RTS3 328 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 NLRP10Q86W26 655 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
SCG2-201ENST00000305409 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 ATP5JP18859 108 aa13.75□□□□□ -0.21
SCG2-201ENST00000305409 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
SCG2-201ENST00000305409 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 GOLIM4O00461 696 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms