RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 ANKRD62A6NC57 917 aa24.33■■□□□ 1.48
LETM1-201ENST00000302787 SNRPA1P09661 255 aaKnown RBP24.32■■□□□ 1.48
LETM1-201ENST00000302787 RLBP1P12271 317 aa24.32■■□□□ 1.48
LETM1-201ENST00000302787 SNW1Q13573 536 aaKnown RBP24.32■■□□□ 1.48
LETM1-201ENST00000302787 TAF3Q5VWG9 929 aa24.32■■□□□ 1.48
LETM1-201ENST00000302787 DDX46Q7L014 1031 aaKnown RBP24.32■■□□□ 1.48
LETM1-201ENST00000302787 ZRSR2Q15696 482 aaKnown RBP24.31■■□□□ 1.48
LETM1-201ENST00000302787 CRACR2BQ8N4Y2 399 aaPredicted RBP24.31■■□□□ 1.48
LETM1-201ENST00000302787 PANK2Q9BZ23 570 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 RBM8AQ9Y5S9 174 aaKnown RBP24.31■■□□□ 1.48
LETM1-201ENST00000302787 ISM2Q6H9L7 571 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 EIF2AK4Q9P2K8 1649 aaKnown RBP24.31■■□□□ 1.48
LETM1-201ENST00000302787 PPIP5K1Q6PFW1 1433 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 CCDC102BQ68D86 513 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 TMOD2Q9NZR1 351 aa24.31■■□□□ 1.48
LETM1-201ENST00000302787 PPP1R1BQ9UD71 204 aaPredicted RBP24.31■■□□□ 1.48
LETM1-201ENST00000302787 USO1O60763 962 aaKnown RBP24.3■■□□□ 1.48
LETM1-201ENST00000302787 MATR3P43243 847 aaKnown RBP eCLIP24.3■■□□□ 1.48
LETM1-201ENST00000302787 SLC26A6Q9BXS9 759 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 MFSD6Q6ZSS7 791 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 CCDC150Q8NCX0 1101 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
LETM1-201ENST00000302787 TTC21AQ8NDW8 1320 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 TESK2Q96S53 571 aa24.3■■□□□ 1.48
LETM1-201ENST00000302787 PIK3C2GO75747 1445 aa24.29■■□□□ 1.48
LETM1-201ENST00000302787 CEP135Q66GS9 1140 aa24.29■■□□□ 1.48
LETM1-201ENST00000302787 PRIMPOLQ96LW4 560 aa24.29■■□□□ 1.48
LETM1-201ENST00000302787 SYCP2Q9BX26 1530 aa24.29■■□□□ 1.48
LETM1-201ENST00000302787 ATP10BO94823 1461 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 DYNC1I1O14576 645 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 USP8P40818 1118 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 SSR1P43307 286 aaKnown RBP24.28■■□□□ 1.48
LETM1-201ENST00000302787 KANK3Q6NY19 840 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 VPS36Q86VN1 386 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 TCEANC2Q96MN5 208 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 UBA5Q9GZZ9 404 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 GOLGA6L9A6NEM1 432 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 PLCH2O75038 1416 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 KLF18A0A0U1RQI7 1052 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 PRKCSHP14314 528 aaPredicted RBP24.28■■□□□ 1.48
LETM1-201ENST00000302787 CCDC96Q2M329 555 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 TCOF1Q13428 1488 aaKnown RBP24.28■■□□□ 1.48
LETM1-201ENST00000302787 PPP4R3BQ5MIZ7 849 aa24.28■■□□□ 1.48
LETM1-201ENST00000302787 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 SHTN1A0MZ66 631 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 MTIF2P46199 727 aaKnown RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 EIF4A2Q14240 407 aaKnown RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 ALDH1L1O75891 902 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 F13A1P00488 732 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 ANO6Q4KMQ2 910 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 LRRC2Q9BYS8 371 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 POLKQ9UBT6 870 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 POLR3GO15318 223 aaPredicted RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 ZNF830Q96NB3 372 aaPredicted RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 PLCD4Q9BRC7 762 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 DCTPP1Q9H773 170 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 PAFAH1B1P43034 410 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 TNIP1Q15025 636 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 TDRD12Q587J7 1177 aaKnown RBP24.27■■□□□ 1.48
LETM1-201ENST00000302787 LUZP1Q86V48 1076 aa24.27■■□□□ 1.48
LETM1-201ENST00000302787 CLCN1P35523 988 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 PIP4K2BP78356 416 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 PAXBP1Q9Y5B6 917 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 VAMP4O75379 141 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 RAB3GAP1Q15042 981 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 SMC5Q8IY18 1101 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 KIF20AO95235 890 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 KIF5BP33176 963 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 CEP85Q6P2H3 762 aa24.26■■□□□ 1.47
LETM1-201ENST00000302787 POTEB2H3BUK9 544 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 CCDC178Q5BJE1 867 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 XAGE3Q8WTP9 111 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 GBP2P32456 591 aaPredicted RBP24.25■■□□□ 1.47
LETM1-201ENST00000302787 SYKP43405 635 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 DNA2P51530 1060 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 TSPYL6Q8N831 410 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 FAM200AQ8TCP9 573 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 PYM1Q9BRP8 204 aaKnown RBP24.25■■□□□ 1.47
LETM1-201ENST00000302787 POTEJP0CG39 1038 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 TCP11L1Q9NUJ3 509 aa24.25■■□□□ 1.47
LETM1-201ENST00000302787 GRM8O00222 908 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 PAF1Q8N7H5 531 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 UQCRFS1P1P0C7P4 283 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 MCMDC2Q4G0Z9 681 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
LETM1-201ENST00000302787 CCDC171Q6TFL3 1326 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 Q6ZUG5 572 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 CCDC12Q8WUD4 166 aaPredicted RBP24.24■■□□□ 1.47
LETM1-201ENST00000302787 CALML4Q96GE6 196 aa24.24■■□□□ 1.47
LETM1-201ENST00000302787 CDC5LQ99459 802 aaKnown RBP24.24■■□□□ 1.47
LETM1-201ENST00000302787 AMPD3Q01432 767 aa24.23■■□□□ 1.47
LETM1-201ENST00000302787 DNM1Q05193 864 aaKnown RBP24.23■■□□□ 1.47
LETM1-201ENST00000302787 ZFYP08048 801 aaPredicted RBP24.23■■□□□ 1.47
LETM1-201ENST00000302787 KCNG4Q8TDN1 519 aa24.23■■□□□ 1.47
LETM1-201ENST00000302787 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.23■■□□□ 1.47
LETM1-201ENST00000302787 EXOC5O00471 708 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms