RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 CBX1P83916 185 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 IQCA1Q86XH1 822 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
TSR1-201ENST00000301364 MAGI3Q5TCQ9 1506 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
TSR1-201ENST00000301364 TAF3Q5VWG9 929 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 CTCFLQ8NI51 663 aaPredicted RBP22.4■■□□□ 1.18
TSR1-201ENST00000301364 TRMT1Q9NXH9 659 aaKnown RBP22.4■■□□□ 1.18
TSR1-201ENST00000301364 KIAA1328Q86T90 577 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 ATP5J2-PTCD1G3V325 749 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 CAVIN4Q5BKX8 364 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 LINS1Q8NG48 757 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 ZMYM3Q14202 1370 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 ZNF287Q9HBT7 754 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
TSR1-201ENST00000301364 ZFYP08048 801 aaPredicted RBP22.39■■□□□ 1.18
TSR1-201ENST00000301364 KRT28Q7Z3Y7 464 aa22.39■■□□□ 1.18
TSR1-201ENST00000301364 TRMT112Q9UI30 125 aaKnown RBP22.39■■□□□ 1.18
TSR1-201ENST00000301364 CASQ1P31415 396 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 CCDC150Q8NCX0 1101 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 ZNF397Q8NF99 534 aaPredicted RBP22.39■■□□□ 1.17
TSR1-201ENST00000301364 ZBTB3Q9H5J0 574 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 GOLGA6L9A6NEM1 432 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 TMC6Q7Z403 805 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 SYCP1Q15431 976 aa22.39■■□□□ 1.17
TSR1-201ENST00000301364 KLHL10Q6JEL2 608 aa22.38■■□□□ 1.17
TSR1-201ENST00000301364 DNM1Q05193 864 aaKnown RBP22.38■■□□□ 1.17
TSR1-201ENST00000301364 PTPRTO14522 1441 aa22.38■■□□□ 1.17
TSR1-201ENST00000301364 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
TSR1-201ENST00000301364 CCDC171Q6TFL3 1326 aa22.38■■□□□ 1.17
TSR1-201ENST00000301364 AK2P54819 239 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 ABCC2Q92887 1545 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 CCDC102BQ68D86 513 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 DACT1Q9NYF0 836 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 PATL2C9JE40 543 aaKnown RBP22.37■■□□□ 1.17
TSR1-201ENST00000301364 DDX46Q7L014 1031 aaKnown RBP22.37■■□□□ 1.17
TSR1-201ENST00000301364 ZHX3Q9H4I2 956 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 KCNG4Q8TDN1 519 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 CCDC102AQ96A19 550 aa22.37■■□□□ 1.17
TSR1-201ENST00000301364 BIN1O00499 593 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 RDXP35241 583 aaKnown RBP22.36■■□□□ 1.17
TSR1-201ENST00000301364 KIF4BQ2VIQ3 1234 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 KANK3Q6NY19 840 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 ANO6Q4KMQ2 910 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 POLR3DP05423 398 aaPredicted RBP22.36■■□□□ 1.17
TSR1-201ENST00000301364 IL13P35225 146 aa22.36■■□□□ 1.17
TSR1-201ENST00000301364 SNW1Q13573 536 aaKnown RBP22.36■■□□□ 1.17
TSR1-201ENST00000301364 METAP2P50579 478 aaKnown RBP eCLIP22.36■■□□□ 1.17
TSR1-201ENST00000301364 XAGE3Q8WTP9 111 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 RAD50Q92878 1312 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 CEP135Q66GS9 1140 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 SNRKQ9NRH2 765 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 TSPYL1Q9H0U9 437 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
TSR1-201ENST00000301364 MSH6P52701 1360 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 TMEM67Q5HYA8 995 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
TSR1-201ENST00000301364 ZFYVE27Q5T4F4 411 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 CCDC82Q8N4S0 544 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 PIBF1Q8WXW3 757 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 HAND2P61296 217 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 EYA1Q99502 592 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 ADGBQ8N7X0 1667 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 SSBP05455 408 aaKnown RBP eCLIP22.34■■□□□ 1.17
TSR1-201ENST00000301364 NMIQ13287 307 aaPredicted RBP22.34■■□□□ 1.17
TSR1-201ENST00000301364 CCDC186Q7Z3E2 898 aa22.34■■□□□ 1.17
TSR1-201ENST00000301364 SPA17Q15506 151 aa22.33■■□□□ 1.17
TSR1-201ENST00000301364 MRPS27Q92552 414 aaKnown RBP22.33■■□□□ 1.17
TSR1-201ENST00000301364 RANBP6O60518 1105 aaKnown RBP22.33■■□□□ 1.17
TSR1-201ENST00000301364 MCM3P25205 808 aa22.33■■□□□ 1.17
TSR1-201ENST00000301364 CATIPQ7Z7H3 387 aa22.33■■□□□ 1.17
TSR1-201ENST00000301364 PYM1Q9BRP8 204 aaKnown RBP22.33■■□□□ 1.17
TSR1-201ENST00000301364 MAP9Q49MG5 647 aa22.33■■□□□ 1.16
TSR1-201ENST00000301364 PPP4R3BQ5MIZ7 849 aa22.33■■□□□ 1.16
TSR1-201ENST00000301364 ZNF830Q96NB3 372 aaPredicted RBP22.33■■□□□ 1.16
TSR1-201ENST00000301364 KLF18A0A0U1RQI7 1052 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 CHL1O00533 1208 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 KIAA0754O94854 1291 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 IL15P40933 162 aaPredicted RBP22.32■■□□□ 1.16
TSR1-201ENST00000301364 Q6ZUG5 572 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
TSR1-201ENST00000301364 FKBP15Q5T1M5 1219 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 MICU3Q86XE3 530 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 CRACR2AQ9BSW2 395 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 CREB3L3Q68CJ9 461 aa22.32■■□□□ 1.16
TSR1-201ENST00000301364 UQCRFS1P1P0C7P4 283 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 JAKMIP3Q5VZ66 844 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 SYKP43405 635 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 PBRM1Q86U86 1689 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 MKNK2Q9HBH9 465 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 AOX1Q06278 1338 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 TYRO3Q06418 890 aa22.31■■□□□ 1.16
TSR1-201ENST00000301364 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms