RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
MMP3-201ENST00000299855 NUCB1Q02818 461 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 CCDC102AQ96A19 550 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
MMP3-201ENST00000299855 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
MMP3-201ENST00000299855 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 AGBL1Q96MI9 1066 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
MMP3-201ENST00000299855 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
MMP3-201ENST00000299855 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
MMP3-201ENST00000299855 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
MMP3-201ENST00000299855 NUCB2P80303 420 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 BMS1Q14692 1282 aaKnown RBP10.88□□□□□ -0.67
MMP3-201ENST00000299855 STAG1Q8WVM7 1258 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 KIF2CQ99661 725 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 GEMIN8Q9NWZ8 242 aaKnown RBP10.88□□□□□ -0.67
MMP3-201ENST00000299855 PRKAG2Q9UGJ0 569 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 USP32Q8NFA0 1604 aa10.88□□□□□ -0.67
MMP3-201ENST00000299855 SMAPO00193 183 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 ATF7IPQ6VMQ6 1270 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 CFAP53Q96M91 514 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 EFCAB6Q5THR3 1501 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 IPO8O15397 1037 aaKnown RBP10.87□□□□□ -0.67
MMP3-201ENST00000299855 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
MMP3-201ENST00000299855 KCTD2Q14681 263 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 FILIP1Q7Z7B0 1213 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 MORC1Q86VD1 984 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 ZSWIM4Q9H7M6 989 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 IQSEC3Q9UPP2 1182 aaPredicted RBP10.87□□□□□ -0.67
MMP3-201ENST00000299855 SLIT1O75093 1534 aa10.87□□□□□ -0.67
MMP3-201ENST00000299855 IL16Q14005 1332 aa10.86□□□□□ -0.67
MMP3-201ENST00000299855 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
MMP3-201ENST00000299855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
MMP3-201ENST00000299855 ATP2B1P20020 1258 aa10.86□□□□□ -0.67
MMP3-201ENST00000299855 FLT3P36888 993 aa10.86□□□□□ -0.67
MMP3-201ENST00000299855 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
MMP3-201ENST00000299855 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
MMP3-201ENST00000299855 LDHCP07864 332 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 C7P10643 843 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 TRIM27P14373 513 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 HSD3B2P26439 372 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 TTC39BQ5VTQ0 682 aaPredicted RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 GDPD2Q9HCC8 539 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 SNRKQ9NRH2 765 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 PIK3C2BO00750 1634 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 MYOM2P54296 1465 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 PPP1R12AO14974 1030 aaPredicted RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 HMMRO75330 724 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 FGAP02671 866 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 CC2D1AQ6P1N0 951 aaPredicted RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 CASS4Q9NQ75 786 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 AKAP2Q9Y2D5 859 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 R3HCC1Q9Y3T6 440 aaKnown RBP10.85□□□□□ -0.67
MMP3-201ENST00000299855 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
MMP3-201ENST00000299855 NOS1P29475 1434 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 COL6A1P12109 1028 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
MMP3-201ENST00000299855 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
MMP3-201ENST00000299855 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 JAZF1Q86VZ6 243 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 TET3O43151 1660 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 ABCC11Q96J66 1382 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 LTKP29376 864 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 IDI1Q13907 227 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
MMP3-201ENST00000299855 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 LRRC27Q9C0I9 530 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 SMC4Q9NTJ3 1288 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
MMP3-201ENST00000299855 FAM13BQ9NYF5 915 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 DMGDHQ9UI17 866 aaKnown RBP10.84□□□□□ -0.67
MMP3-201ENST00000299855 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
MMP3-201ENST00000299855 NSD2O96028 1365 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 UQCRHLA0A096LP55 91 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 TOM1O60784 492 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
MMP3-201ENST00000299855 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
MMP3-201ENST00000299855 UQCRHP07919 91 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
MMP3-201ENST00000299855 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms